RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 GPR39O43194 453 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 NARSO43776 548 aaKnown RBP17.24■□□□□ 0.35
CLDN4-201ENST00000340958 RHOBTB1O94844 696 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 ADRB3P13945 408 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 UGT1A6P19224 532 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 UGT1A1P22309 533 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 UGT1A4P22310 534 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 UGT1A3P35503 534 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 UGT1A5P35504 534 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 PTGER3P43115 390 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 KIR2DL1P43626 348 aaPredicted RBP17.24■□□□□ 0.35
CLDN4-201ENST00000340958 SPINT3P49223 89 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 METAP1P53582 386 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 PDAP1Q13442 181 aaKnown RBP17.24■□□□□ 0.35
CLDN4-201ENST00000340958 ERN2Q76MJ5 926 aaKnown RBP17.24■□□□□ 0.35
CLDN4-201ENST00000340958 TRMT11Q7Z4G4 463 aaKnown RBP17.24■□□□□ 0.35
CLDN4-201ENST00000340958 CPLX4Q7Z7G2 160 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 SERPINA9Q86WD7 417 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 LPGAT1Q92604 370 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 FAM136AQ96C01 138 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 RAD18Q9NS91 495 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 RUVBL2Q9Y230 463 aaKnown RBP17.24■□□□□ 0.35
CLDN4-201ENST00000340958 OR1I1O60431 355 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 SLC35E2BP0CK96 405 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 ZNF7P17097 686 aaPredicted RBP17.24■□□□□ 0.35
CLDN4-201ENST00000340958 NTSR1P30989 418 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 GMPRP36959 345 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 MMP12P39900 470 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 SERPINB4P48594 390 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 ITGA9Q13797 1035 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 CCDC153Q494R4 210 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 GPR33Q49SQ1 333 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 PPP1R14CQ8TAE6 165 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 BCAS4Q8TDM0 211 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 PLEKHG4BQ96PX9 1271 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 OLFM1Q99784 485 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 AARSD1Q9BTE6 412 aaKnown RBP17.24■□□□□ 0.35
CLDN4-201ENST00000340958 CLPBQ9H078 707 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 FAM83DQ9H4H8 585 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 C11orf16Q9NQ32 467 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 DUSP12Q9UNI6 340 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 ITM2BQ9Y287 266 aa17.24■□□□□ 0.35
CLDN4-201ENST00000340958 FAM86C2PA6NEL3 165 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 E5RI56 91 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 PLK4O00444 970 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 DNAJC6O75061 913 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 KLF8O95600 359 aaPredicted RBP17.23■□□□□ 0.35
CLDN4-201ENST00000340958 COL6A2P12110 1019 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 ETV3P41162 512 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 SUOXP51687 545 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 KPNA2P52292 529 aaKnown RBP17.23■□□□□ 0.35
CLDN4-201ENST00000340958 CDKN2DP55273 166 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 HNRNPH2P55795 449 aaKnown RBP17.23■□□□□ 0.35
CLDN4-201ENST00000340958 ZKSCAN8Q15776 578 aaPredicted RBP17.23■□□□□ 0.35
CLDN4-201ENST00000340958 PDK4Q16654 411 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 ZNF284Q2VY69 593 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 TMEM196Q5HYL7 178 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 PTRHD1Q6GMV3 140 aaKnown RBP17.23■□□□□ 0.35
CLDN4-201ENST00000340958 ZNF549Q6P9A3 640 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 RFLNAQ6ZTI6 216 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 HSD11B1LQ7Z5J1 315 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 UBALD2Q8IYN6 164 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 RBFAQ8N0V3 343 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 PLD6Q8N2A8 252 aaKnown RBP17.23■□□□□ 0.35
CLDN4-201ENST00000340958 GANCQ8TET4 914 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 KCTD4Q8WVF5 259 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 CCDC134Q9H6E4 229 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 NMRAL1Q9HBL8 299 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 TAS2R13Q9NYV9 303 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 TMEM216Q9P0N5 145 aa17.23■□□□□ 0.35
CLDN4-201ENST00000340958 VPS26AO75436 327 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 CHRM3P20309 590 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 ACRV1P26436 265 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 ETV4P43268 484 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 GLRBP48167 497 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 SATB1Q01826 763 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 CCDC15Q0P6D6 951 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 DBN1Q16643 649 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 FAM83EQ2M2I3 478 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 KLC3Q6P597 504 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 LCA5Q86VQ0 697 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 NUDCD3Q8IVD9 361 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 SPATA6LQ8N4H0 392 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 KCNV2Q8TDN2 545 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 ULK4Q96C45 1275 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 NSRP1Q9H0G5 558 aaKnown RBP17.22■□□□□ 0.35
CLDN4-201ENST00000340958 ZNF358Q9NW07 568 aa17.22■□□□□ 0.35
CLDN4-201ENST00000340958 MUC22E2RYF6 1773 aaPredicted RBP17.22■□□□□ 0.35
CLDN4-201ENST00000340958 GAPDHSO14556 408 aaPredicted RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 NDUFAB1O14561 156 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 PRMT5O14744 637 aaPredicted RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 MID1O15344 667 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 LZTS3O60299 673 aaPredicted RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 ADH1BP00325 375 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 PYGLP06737 847 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 PKMP14618 531 aaKnown RBP17.21■□□□□ 0.35
CLDN4-201ENST00000340958 HOXB2P14652 356 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 GLULP15104 373 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 LIG3P49916 1009 aa17.21■□□□□ 0.35
CLDN4-201ENST00000340958 SIGLEC14Q08ET2 396 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms