RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 HIPK3Q9H422 1215 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 PLGRKTQ9HBL7 147 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 PTBP2Q9UKA9 531 aaKnown RBP19.25■□□□□ 0.67
SCARB1-201ENST00000261693 RNF112Q9ULX5 631 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 GIT1Q9Y2X7 761 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 GPR45Q9Y5Y3 372 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 OAS3Q9Y6K5 1087 aaKnown RBP19.25■□□□□ 0.67
SCARB1-201ENST00000261693 H3BMQ9 156 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 TNPO2O14787 897 aaKnown RBP19.25■□□□□ 0.67
SCARB1-201ENST00000261693 MATN4O95460 622 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 TBX18O95935 607 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 CHRNA1P02708 482 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 AGTR2P50052 363 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 KCNK10P57789 538 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 CYBRD1Q53TN4 286 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 PAQR3Q6TCH7 311 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 ABRAXAS1Q6UWZ7 409 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 BBS5Q8N3I7 341 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 FBXO39Q8N4B4 442 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 DHRSXQ8N5I4 330 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 GPR152Q8TDT2 470 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 IGSF8Q969P0 613 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 GFM2Q969S9 779 aaKnown RBP19.25■□□□□ 0.67
SCARB1-201ENST00000261693 ESAMQ96AP7 390 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 COG8Q96MW5 612 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 ASB2Q96Q27 587 aa19.25■□□□□ 0.67
SCARB1-201ENST00000261693 SMPD3Q9NY59 655 aaPredicted RBP19.25■□□□□ 0.67
SCARB1-201ENST00000261693 A0A1W2PPW3 197 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 HMBSP08397 361 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 RFC2P35250 354 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 LCP2Q13094 533 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 DDR2Q16832 855 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 SLC39A12Q504Y0 691 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 PYCR3Q53H96 274 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 MRNIPQ6NTE8 343 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 TBPL2Q6SJ96 375 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 RSPH1Q8WYR4 309 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 ACOX2Q99424 681 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 RPF2Q9H7B2 306 aaKnown RBP19.24■□□□□ 0.67
SCARB1-201ENST00000261693 CHCHD3Q9NX63 227 aaKnown RBP19.24■□□□□ 0.67
SCARB1-201ENST00000261693 CPA4Q9UI42 421 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 TDRD15B5MCY1 1934 aaKnown RBP19.24■□□□□ 0.67
SCARB1-201ENST00000261693 LOC285095A0A1B0GVY8 99 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 A0A1W2PP18 115 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 TCRBV5S2A0A599 114 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 ENPP3O14638 875 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 MUSKO15146 869 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 CYBBP04839 570 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 CD247P20963 164 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 FMO4P31512 558 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 CAPGP40121 348 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 RPS9P46781 194 aaKnown RBP19.24■□□□□ 0.67
SCARB1-201ENST00000261693 PURAQ00577 322 aaKnown RBP19.24■□□□□ 0.67
SCARB1-201ENST00000261693 EFEMP1Q12805 493 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 TSNQ15631 228 aaKnown RBP19.24■□□□□ 0.67
SCARB1-201ENST00000261693 TIGD2Q4W5G0 525 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 FGD3Q5JSP0 725 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 OTUD3Q5T2D3 398 aaPredicted RBP19.24■□□□□ 0.67
SCARB1-201ENST00000261693 KCTD8Q6ZWB6 473 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 KIAA2013Q8IYS2 634 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 THEM5Q8N1Q8 247 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 THAP11Q96EK4 314 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 PRDM5Q9NQX1 630 aaPredicted RBP19.24■□□□□ 0.67
SCARB1-201ENST00000261693 CATSPERZQ9NTU4 200 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 INTS7Q9NVH2 962 aaKnown RBP19.24■□□□□ 0.67
SCARB1-201ENST00000261693 ANAPC2Q9UJX6 822 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 TRPV2Q9Y5S1 764 aa19.24■□□□□ 0.67
SCARB1-201ENST00000261693 MYADML2A6NDP7 307 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 WASH4PA8MWX3 477 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 CDC7O00311 574 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 B4GAT1O43505 415 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 RHOBTB1O94844 696 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 CYP11A1P05108 521 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 GPIP06744 558 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 TBX4P57082 545 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 TNK2Q07912 1038 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 FSCN1Q16658 493 aaKnown RBP19.23■□□□□ 0.67
SCARB1-201ENST00000261693 ZIK1Q3SY52 487 aaPredicted RBP19.23■□□□□ 0.67
SCARB1-201ENST00000261693 RAP1GAP2Q684P5 730 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 TAF2Q6P1X5 1199 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 MIB1Q86YT6 1006 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 OR4L1Q8NH43 312 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 ADAMTS16Q8TE57 1224 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 C1orf74Q96LT6 269 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 SEZ6LQ9BYH1 1024 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 TRIM54Q9BYV2 358 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 MGEA5O60502 916 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 RHOQP17081 205 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 ACVRL1P37023 503 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 POLD3Q15054 466 aaPredicted RBP19.23■□□□□ 0.67
SCARB1-201ENST00000261693 MSANTD2Q6P1R3 559 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 ZNF683Q8IZ20 524 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 RHEBL1Q8TAI7 183 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 SLC30A3Q99726 388 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 PTPN18Q99952 460 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 KATNAL1Q9BW62 490 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 CLEC11AQ9Y240 323 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 TLR6Q9Y2C9 796 aa19.23■□□□□ 0.67
SCARB1-201ENST00000261693 SH3PXD2BA1X283 911 aa19.22■□□□□ 0.67
SCARB1-201ENST00000261693 CCDC154A6NI56 674 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms