RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 GIMAP4Q9NUV9 329 aa4.12□□□□□ -1.75
CDR1-202ENST00000625883 MRPL15Q9P015 296 aaKnown RBP4.12□□□□□ -1.75
CDR1-202ENST00000625883 TTC7AQ9ULT0 858 aaPredicted RBP4.12□□□□□ -1.75
CDR1-202ENST00000625883 CPED1A4D0V7 1026 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 GLOD5A6NK44 160 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 OR6C75A6NL08 312 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 H3BNX3 289 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 ADAMDEC1O15204 470 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 DDNO94850 711 aaPredicted RBP4.11□□□□□ -1.75
CDR1-202ENST00000625883 MMP9P14780 707 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 SAT1P21673 171 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 LMO1P25800 156 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 AMTP48728 403 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 PLCD1P51178 756 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 ZNF81P51508 661 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 SREBF2Q12772 1141 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 PAPPA-AS1Q5QFB9 102 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 FAM69BQ5VUD6 431 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 GARNL3Q5VVW2 1013 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 TYW3Q6IPR3 259 aaKnown RBP4.11□□□□□ -1.75
CDR1-202ENST00000625883 SLC30A6Q6NXT4 461 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 KRT74Q7RTS7 529 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 ADGRA1Q86SQ6 560 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 SCYL3Q8IZE3 742 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 DSELQ8IZU8 1212 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 BEST3Q8N1M1 668 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 OR2AK2Q8NG84 335 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 ASB5Q8WWX0 329 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 TXNDC15Q96J42 360 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 ZNF48Q96MX3 618 aaPredicted RBP4.11□□□□□ -1.75
CDR1-202ENST00000625883 CAMK1GQ96NX5 476 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 SLC29A3Q9BZD2 475 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 DCLK3Q9C098 648 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 MAGIXQ9H6Y5 334 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 MORF4L1Q9UBU8 362 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 OR14J1Q9UGF5 321 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 AGO1Q9UL18 857 aaKnown RBP4.11□□□□□ -1.75
CDR1-202ENST00000625883 ACSL5Q9ULC5 683 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 EXO1Q9UQ84 846 aaKnown RBP4.11□□□□□ -1.75
CDR1-202ENST00000625883 PAM16Q9Y3D7 125 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 MAGED1Q9Y5V3 778 aaPredicted RBP4.11□□□□□ -1.75
CDR1-202ENST00000625883 SQORQ9Y6N5 450 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 FAM169AQ9Y6X4 670 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 ZNF521Q96K83 1311 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 M0QZ24 198 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 KCNK5O95279 499 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 CH25HO95992 272 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 EGFP01133 1207 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 HIST1H2ABP04908 130 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 TRIM21P19474 475 aaKnown RBP4.11□□□□□ -1.75
CDR1-202ENST00000625883 HIST1H2ADP20671 130 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 RRM1P23921 792 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 ARRB2P32121 409 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 RRP1P56182 461 aaKnown RBP4.11□□□□□ -1.75
CDR1-202ENST00000625883 ECT2LQ008S8 904 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 GRIK2Q13002 908 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 DLG2Q15700 870 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 GPR139Q6DWJ6 353 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 NAA16Q6N069 864 aaPredicted RBP4.11□□□□□ -1.75
CDR1-202ENST00000625883 RPUSD3Q6P087 351 aaKnown RBP4.11□□□□□ -1.75
CDR1-202ENST00000625883 PDXDC1Q6P996 788 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 SLC36A4Q6YBV0 504 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 HIST3H2AQ7L7L0 130 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 PELI3Q8N2H9 469 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 APBB2Q92870 758 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 HMCESQ96FZ2 354 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 C17orf75Q9HAS0 396 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 EPB41L5Q9HCM4 733 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 NOX4Q9NPH5 578 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.11□□□□□ -1.75
CDR1-202ENST00000625883 NFKBIL1Q9UBC1 381 aaPredicted RBP4.11□□□□□ -1.75
CDR1-202ENST00000625883 PLAGL1Q9UM63 463 aa4.11□□□□□ -1.75
CDR1-202ENST00000625883 KANSL1LA0AUZ9 987 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 LNP1A1A4G5 178 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 SOCS6O14544 535 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 MAP2K7O14733 419 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 SMAD9O15198 467 aaKnown RBP4.1□□□□□ -1.75
CDR1-202ENST00000625883 PLRG1O43660 514 aaKnown RBP4.1□□□□□ -1.75
CDR1-202ENST00000625883 GPC4O75487 556 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 CSPG5O95196 566 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 HOXD3P31249 432 aaPredicted RBP4.1□□□□□ -1.75
CDR1-202ENST00000625883 STX2P32856 288 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 APOBEC1P41238 236 aaKnown RBP4.1□□□□□ -1.75
CDR1-202ENST00000625883 MSH2P43246 934 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 MMP14P50281 582 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 HNRNPH2P55795 449 aaKnown RBP4.1□□□□□ -1.75
CDR1-202ENST00000625883 CXCL9Q07325 125 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 CDC16Q13042 620 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 KCNC3Q14003 757 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 KRT79Q5XKE5 535 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 NSUN5P2Q63ZY6 315 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 FRG2Q64ET8 278 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 DUS1LQ6P1R4 473 aaKnown RBP4.1□□□□□ -1.75
CDR1-202ENST00000625883 KRBA2Q6ZNG9 492 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 DENND5BQ6ZUT9 1274 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 DNAAF5Q86Y56 855 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 NRROSQ86YC3 692 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 CHERPQ8IWX8 916 aaKnown RBP4.1□□□□□ -1.75
CDR1-202ENST00000625883 OR1J2Q8NGS2 313 aa4.1□□□□□ -1.75
CDR1-202ENST00000625883 HM13Q8TCT9 377 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms