RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 MPP7Q5T2T1 576 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 LILRA6Q6PI73 481 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 RAB44Q7Z6P3 723 aaPredicted RBP19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 FBXW8Q8N3Y1 598 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 TTC16Q8NEE8 873 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 STAG3L4Q8TBR4 150 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 EXT2Q93063 718 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 ACDQ96AP0 544 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 ASB2Q96Q27 587 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 MAGEE1Q9HCI5 957 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 IL17CQ9P0M4 197 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 CFAP97Q9P2B7 532 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 SH3BP1Q9Y3L3 701 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 K7ERQ8 282 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 AIM2O14862 343 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 PYGLP06737 847 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 PKMP14618 531 aaKnown RBP19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 NUDT2P50583 147 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 MTTPP55157 894 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 ZRANB3Q5FWF4 1079 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 AARS2Q5JTZ9 985 aaKnown RBP19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 ARMC12Q5T9G4 340 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 BBS7Q8IWZ6 715 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 KYQ8NBH2 561 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 MYO19Q96H55 970 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 MARK4Q96L34 752 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 GPR21Q99679 349 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 LBHD1Q9BQE6 289 aaPredicted RBP19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 ZNF711Q9Y462 761 aa19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 KIAA0100Q14667 2235 aaKnown RBP19.63■□□□□ 0.73
PCDHB11-202ENST00000624887 FKBP6O75344 327 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 PDE5AO76074 875 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 PGLSO95336 258 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 ADARP55265 1226 aaKnown RBP19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 AP2B1P63010 937 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 XIAPP98170 497 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 TAF11Q15544 211 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 PFKFB4Q16877 469 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 MPPE1Q53F39 396 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 C16orf89Q6UX73 402 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 LRRC74BQ6ZQY2 392 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 CCDC149Q6ZUS6 474 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 NKAPQ8N5F7 415 aaKnown RBP19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 PIH1D2Q8WWB5 315 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 NRG4Q8WWG1 115 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 TM6SF2Q9BZW4 377 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 PCDH10Q9P2E7 1040 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 ANGPTL2Q9UKU9 493 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 SUFUQ9UMX1 484 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 PKP3Q9Y446 797 aa19.62■□□□□ 0.73
PCDHB11-202ENST00000624887 TRAV19A0A0A6YYK7 116 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 CCDC189A1A4V9 331 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 SMAD6O43541 496 aaKnown RBP19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 OR1I1O60431 355 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 VPS26AO75436 327 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 LINC00271P0C7V0 271 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 HMGCLP35914 325 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 CTSL3PQ5NE16 218 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 AAGABQ6PD74 315 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 OTOP2Q7RTS6 562 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 N4BP2L2Q92802 583 aaPredicted RBP19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 IL23AQ9NPF7 189 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 PRPF19Q9UMS4 504 aaKnown RBP19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 COMMD10Q9Y6G5 202 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 WASF2Q9Y6W5 498 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 A0A0U1RQS6 177 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 SIX3O95343 332 aaPredicted RBP19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 PRAMEF12O95522 483 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 C8AP07357 584 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 GFAPP14136 432 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 TSPAN8P19075 237 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 PTGER3P43115 390 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 RPL26P61254 145 aaKnown RBP19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 CMPK2Q5EBM0 449 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 UBE2Q1Q7Z7E8 422 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 CAMK1DQ8IU85 385 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 DSELQ8IZU8 1212 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 MIEF2Q96C03 454 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 EID2BQ96D98 161 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 GPR63Q9BZJ6 419 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 NMRK1Q9NWW6 199 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 KIAA1522Q9P206 1035 aaPredicted RBP19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 GALPQ9UBC7 116 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 IKZF3Q9UKT9 509 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 RNF112Q9ULX5 631 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 POMPQ9Y244 141 aa19.61■□□□□ 0.73
PCDHB11-202ENST00000624887 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 SORBS2O94875 1100 aaKnown RBP19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 CXCL14O95715 111 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 FGF4P08620 206 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 ANPEPP15144 967 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 MAPK8P45983 427 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 CSNK1DP48730 415 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 CDH13P55290 713 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 SH3BP2P78314 561 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 CACNG1Q06432 222 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 LMAN2Q12907 356 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 UGT3A2Q3SY77 523 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 CLEC6AQ6EIG7 209 aa19.6■□□□□ 0.73
PCDHB11-202ENST00000624887 CYHR1Q6ZMK1 362 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms