RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 HLA-EP13747 358 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 ITGALP20701 1170 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 SUOXP51687 545 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 KPNA2P52292 529 aaKnown RBP21.48■■□□□ 1.03
USP6NL-204ENST00000606752 ADARP55265 1226 aaKnown RBP21.48■■□□□ 1.03
USP6NL-204ENST00000606752 TIAL1Q01085 375 aaKnown RBP eCLIP21.48■■□□□ 1.036e-6■□□□□ 8.9
USP6NL-204ENST00000606752 AGAP9Q5VTM2 703 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 CGB2Q6NT52 195 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 SERPINA13PQ6UXR4 307 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 SPATA21Q7Z572 469 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 C10orf107Q8IVU9 208 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 FSTL5Q8N475 847 aaPredicted RBP21.48■■□□□ 1.03
USP6NL-204ENST00000606752 TMEM151AQ8N4L1 468 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 RDH11Q8TC12 318 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 SCYL1Q96KG9 808 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 BIRC8Q96P09 236 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 TTC1Q99614 292 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 ASB8Q9H765 288 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 CD207Q9UJ71 328 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 ANHXE9PGG2 379 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 G3V2L1 256 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 IL1BP01584 269 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 LTA4HP09960 611 aaKnown RBP21.48■■□□□ 1.03
USP6NL-204ENST00000606752 ZNF30P17039 623 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 VIPR1P32241 457 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 BST1Q10588 318 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 NFATC2Q13469 925 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 HTR4Q13639 388 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 GPR33Q49SQ1 333 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 LRRC73Q5JTD7 316 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 ZDHHC20Q5W0Z9 365 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 LRRC8EQ6NSJ5 796 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 TTC7BQ86TV6 843 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 SPATA6LQ8N4H0 392 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 ANKS4BQ8N8V4 417 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 GPR26Q8NDV2 337 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 TMIEQ8NEW7 156 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 PPP1R14CQ8TAE6 165 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 HEXDCQ8WVB3 486 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 OR8D1Q8WZ84 308 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 IGSF5Q9NSI5 407 aa21.48■■□□□ 1.03
USP6NL-204ENST00000606752 CPSF2Q9P2I0 782 aaKnown RBP21.48■■□□□ 1.03
USP6NL-204ENST00000606752 THAP10Q9P2Z0 257 aaPredicted RBP21.48■■□□□ 1.03
USP6NL-204ENST00000606752 C16orf96A6NNT2 1141 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 OR1I1O60431 355 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 APODP05090 189 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 CCDC166P0CW27 439 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 PKMP14618 531 aaKnown RBP21.47■■□□□ 1.03
USP6NL-204ENST00000606752 XPAP23025 273 aaPredicted RBP21.47■■□□□ 1.03
USP6NL-204ENST00000606752 GLRBP48167 497 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 RGS19P49795 217 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 SF3A3Q12874 501 aaKnown RBP eCLIP21.47■■□□□ 1.03
USP6NL-204ENST00000606752 ARHGEF7Q14155 803 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 CSHL1Q14406 222 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 ELAVL3Q14576 367 aaKnown RBP21.47■■□□□ 1.03
USP6NL-204ENST00000606752 CHRNA6Q15825 494 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 TMEM207Q6UWW9 146 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 PIM3Q86V86 326 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 MICALL1Q8N3F8 863 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 ZNF398Q8TD17 642 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 PCDH12Q9NPG4 1184 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 TAS2R13Q9NYV9 303 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 COMMD10Q9Y6G5 202 aa21.47■■□□□ 1.03
USP6NL-204ENST00000606752 TRBV5-4A0A0C4DH59 114 aa21.46■■□□□ 1.03
USP6NL-204ENST00000606752 GPR39O43194 453 aa21.46■■□□□ 1.03
USP6NL-204ENST00000606752 FGF3P11487 239 aaPredicted RBP21.46■■□□□ 1.03
USP6NL-204ENST00000606752 STX3Q13277 289 aa21.46■■□□□ 1.03
USP6NL-204ENST00000606752 ITIH4Q14624 930 aa21.46■■□□□ 1.03
USP6NL-204ENST00000606752 LYPLAL1Q5VWZ2 237 aa21.46■■□□□ 1.03
USP6NL-204ENST00000606752 SERPINA9Q86WD7 417 aa21.46■■□□□ 1.03
USP6NL-204ENST00000606752 SPATS2Q86XZ4 545 aaKnown RBP21.46■■□□□ 1.03
USP6NL-204ENST00000606752 ANKRD49Q8WVL7 239 aa21.46■■□□□ 1.03
USP6NL-204ENST00000606752 MRPL57Q9BQC6 102 aaKnown RBP21.46■■□□□ 1.03
USP6NL-204ENST00000606752 PPM1HQ9ULR3 514 aa21.46■■□□□ 1.03
USP6NL-204ENST00000606752 TARM1B6A8C7 271 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 KPNA3O00505 521 aaPredicted RBP21.45■■□□□ 1.03
USP6NL-204ENST00000606752 RHOBTB1O94844 696 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 ESR1P03372 595 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 C1SP09871 688 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 SBK3P0C264 359 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 MYL2P10916 166 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 CD9P21926 228 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 SPINT3P49223 89 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 PDAP1Q13442 181 aaKnown RBP21.45■■□□□ 1.03
USP6NL-204ENST00000606752 CES4AQ5XG92 561 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 KLC3Q6P597 504 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 ZYG11AQ6WRX3 759 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 C7orf26Q96N11 449 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 PLEKHG4BQ96PX9 1271 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 MRPL46Q9H2W6 279 aaKnown RBP21.45■■□□□ 1.03
USP6NL-204ENST00000606752 SUN2Q9UH99 717 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 SARDHQ9UL12 918 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 HCN2Q9UL51 889 aa21.45■■□□□ 1.03
USP6NL-204ENST00000606752 COL4A3Q01955 1670 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 DENND4AQ7Z401 1863 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 TK2O00142 265 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 PRMT5O14744 637 aaPredicted RBP21.45■■□□□ 1.02
USP6NL-204ENST00000606752 SNNO75324 88 aaPredicted RBP21.45■■□□□ 1.02
USP6NL-204ENST00000606752 SERPINE1P05121 402 aa21.45■■□□□ 1.02
USP6NL-204ENST00000606752 RALBP11234 206 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms