RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CNSTQ6PJW8 725 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 CACUL1Q86Y37 369 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 PLEKHG4BQ96PX9 1271 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 SSU72Q9NP77 194 aaKnown RBP22.17■■□□□ 1.14
ATG4D-209ENST00000588857 RAD18Q9NS91 495 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 SMG5Q9UPR3 1016 aaKnown RBP22.17■■□□□ 1.14
ATG4D-209ENST00000588857 ITM2BQ9Y287 266 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 GOLGA8CPA6NN73 597 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 H0Y858 1186 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 TPP1O14773 563 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 SPAG7O75391 227 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 NDUFS3O75489 264 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 ALDOAP04075 364 aaKnown RBP22.16■■□□□ 1.14
ATG4D-209ENST00000588857 PRSS56P0CW18 603 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 TYK2P29597 1187 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 PPARGP37231 505 aaPredicted RBP22.16■■□□□ 1.14
ATG4D-209ENST00000588857 POLD2P49005 469 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 CLCN5P51795 746 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 RPS14P62263 151 aaKnown RBP22.16■■□□□ 1.14
ATG4D-209ENST00000588857 ZNF789Q5FWF6 425 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 RNF187Q5TA31 235 aaPredicted RBP22.16■■□□□ 1.14
ATG4D-209ENST00000588857 PSAPL1Q6NUJ1 521 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 HSD11B1LQ7Z5J1 315 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 SNX20Q7Z614 316 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 PNPLA1Q8N8W4 532 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 GPATCH11Q8N954 259 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 GPR26Q8NDV2 337 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 TTC1Q99614 292 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 ASB8Q9H765 288 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 ARHGEF3Q9NR81 526 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 SLC39A10Q9ULF5 831 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 FAM95CA0A1B0GW59 222 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 A0A1W2PQF6 199 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 TMEM120BA0PK00 339 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 RGSL1A5PLK6 1076 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 PSMD11O00231 422 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 AREL1O15033 823 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 SAT1P21673 171 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 CDKN1CP49918 316 aaPredicted RBP22.16■■□□□ 1.14
ATG4D-209ENST00000588857 COPAP53621 1224 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 NFATC2Q13469 925 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 USP10Q14694 798 aaKnown RBP22.16■■□□□ 1.14
ATG4D-209ENST00000588857 LIPIQ6XZB0 460 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 CERS6Q6ZMG9 384 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 PIANPQ8IYJ0 282 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 ZNF398Q8TD17 642 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 ACMSDQ8TDX5 336 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 ELMO2Q96JJ3 720 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 WRAP53Q9BUR4 548 aaKnown RBP22.16■■□□□ 1.14
ATG4D-209ENST00000588857 CDH19Q9H159 772 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 FBXL21Q9UKT6 434 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 CRYL1Q9Y2S2 319 aa22.16■■□□□ 1.14
ATG4D-209ENST00000588857 GAPDHSO14556 408 aaPredicted RBP22.15■■□□□ 1.14
ATG4D-209ENST00000588857 PRPF4O43172 522 aaKnown RBP eCLIP22.15■■□□□ 1.14
ATG4D-209ENST00000588857 DNTTP04053 509 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 LIG3P49916 1009 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 PPARDQ03181 441 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 SLC18A2Q05940 514 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 ACOX1Q15067 660 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 CHRNA6Q15825 494 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 GPR33Q49SQ1 333 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 HDDC3Q8N4P3 179 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 AADATQ8N5Z0 425 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 BANPQ8N9N5 519 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 FAM83DQ9H4H8 585 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 SNX15Q9NRS6 342 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 PCMTD2Q9NV79 361 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 NKIRAS1Q9NYS0 192 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 WNT16Q9UBV4 365 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 CORO1CQ9ULV4 474 aaPredicted RBP22.15■■□□□ 1.14
ATG4D-209ENST00000588857 MRPS17Q9Y2R5 130 aaKnown RBP22.15■■□□□ 1.14
ATG4D-209ENST00000588857 PLXNA2O75051 1894 aa22.15■■□□□ 1.14
ATG4D-209ENST00000588857 UBA6A0AVT1 1052 aaPredicted RBP22.14■■□□□ 1.13
ATG4D-209ENST00000588857 FAM47DPA6NHR8 397 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 COPEO14579 308 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 SPINT1O43278 529 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 DRD3P35462 400 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 SLC12A2P55011 1212 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 POU4F1Q01851 419 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 PIP5KL1Q5T9C9 394 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 LYPLAL1Q5VWZ2 237 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.14■■□□□ 1.13
ATG4D-209ENST00000588857 RFLNAQ6ZTI6 216 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 SH2D5Q6ZV89 423 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 Q6ZVL8 140 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 TMPRSS6Q8IU80 811 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 SLC41A1Q8IVJ1 513 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 GANCQ8TET4 914 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 ISL2Q96A47 359 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 APOPT1Q96IL0 206 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 SHDQ96IW2 340 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 CABS1Q96KC9 395 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 OMDQ99983 421 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 MKRN2Q9H000 416 aaKnown RBP22.14■■□□□ 1.13
ATG4D-209ENST00000588857 CAB39LQ9H9S4 337 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 CD84Q9UIB8 345 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 CRLS1Q9UJA2 301 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 MMP17Q9ULZ9 603 aa22.14■■□□□ 1.13
ATG4D-209ENST00000588857 PLXNB3Q9ULL4 1909 aa22.13■■□□□ 1.13
ATG4D-209ENST00000588857 RNASEH2AO75792 299 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms