RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 HCN3Q9P1Z3 774 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 FAM237BA0A1B0GVD1 139 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 E2F3O00716 465 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 UROSP10746 265 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 POM121L1PQ3SYA9 428 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 FAM153CQ494X1 144 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 HHIPL2Q6UWX4 724 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 HCAR2Q8TDS4 363 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 TRIM43Q96BQ3 446 aaPredicted RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 TIMM13Q9Y5L4 95 aaPredicted RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 IFI35P80217 286 aaPredicted RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 ZNF782Q6ZMW2 699 aaPredicted RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 ZNF571Q7Z3V5 609 aaPredicted RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 THAP5Q7Z6K1 395 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 ZBTB46Q86UZ6 589 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 FAM151AQ8WW52 585 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 PRELID1Q9Y255 219 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 DDX3XO00571 662 aaKnown RBP eCLIP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 FPGTO14772 594 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 TRMUO75648 421 aaKnown RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 IL1BP01584 269 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 LAMP2P13473 410 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 RPS2P15880 293 aaKnown RBP15.32■□□□□ 0.04
HMGA2-210ENST00000541363 MTX3Q5HYI7 312 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 STOML3Q8TAV4 291 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 EGFL7Q9UHF1 273 aa15.32■□□□□ 0.04
HMGA2-210ENST00000541363 RPS9P46781 194 aaKnown RBP15.31■□□□□ 0.04
HMGA2-210ENST00000541363 SLC10A7Q0GE19 358 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 DCST1Q5T197 706 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 RAB12Q6IQ22 244 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 AMIGO2Q86SJ2 522 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 IL1RAPQ9NPH3 570 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 MARCH2Q9P0N8 246 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 RAP2CQ9Y3L5 183 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 OVOS2A0A0G2JMS6 1433 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 OVOS2A0A0J9YW53 1432 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 OVOS2Q6IE36 1432 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 NLRP1Q9C000 1473 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 CD2P06729 351 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 TFEBP19484 476 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 C3orf67Q6ZVT6 689 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 NUP54Q7Z3B4 507 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 PIGXQ8TBF5 258 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 UFD1Q92890 307 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 ZSWIM3Q96MP5 696 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 BPIFA1Q9NP55 256 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 BTBD19C9JJ37 291 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 NOL4O94818 638 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 ELP6Q0PNE2 266 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 KLHL26Q53HC5 615 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 TMCO6Q96DC7 493 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 CERS2Q96G23 380 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 ZNF700Q9H0M5 742 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 MUC13Q9H3R2 512 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 TMEM39AQ9NV64 488 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 ABCD2Q9UBJ2 740 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 CARD8Q9Y2G2 431 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 ZNF20P17024 532 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 ADGRG6Q86SQ4 1221 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 OSMRQ99650 979 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 TOR3AQ9H497 397 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 TRPV4Q9HBA0 871 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 CPSF4LA6NMK7 179 aaKnown RBP15.31■□□□□ 0.04
HMGA2-210ENST00000541363 WASHC1A8K0Z3 465 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 WASH3PC4AMC7 463 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 PER2O15055 1255 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 CA9Q16790 459 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 GCNT6Q5T4J0 391 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 WASH2PQ6VEQ5 465 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 FBXO16Q8IX29 292 aaPredicted RBP15.31■□□□□ 0.04
HMGA2-210ENST00000541363 ZNF398Q8TD17 642 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 C16orf58Q96GQ5 468 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 TUBGCP5Q96RT8 1024 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 NXF3Q9H4D5 531 aaKnown RBP15.31■□□□□ 0.04
HMGA2-210ENST00000541363 COPS7AQ9UBW8 275 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 FABP3P05413 133 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 DDX6P26196 483 aaKnown RBP eCLIP15.31■□□□□ 0.042e-7■■■□□ 18.3
HMGA2-210ENST00000541363 GFOD2Q3B7J2 385 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 PPP1R15BQ5SWA1 713 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 ZNF627Q7L945 461 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 RANBP3LQ86VV4 465 aaPredicted RBP15.31■□□□□ 0.04
HMGA2-210ENST00000541363 DENND1CQ8IV53 801 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 HDAC7Q8WUI4 952 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 HEXDCQ8WVB3 486 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 PEX16Q9Y5Y5 336 aa15.31■□□□□ 0.04
HMGA2-210ENST00000541363 APOC4-APOC2K7ER74 178 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 TRBC1P01850 177 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 APOC2P02655 101 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 PAX3P23760 479 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 SSR2P43308 183 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 NAGLUP54802 743 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 CADM2Q8N3J6 435 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 MPP5Q8N3R9 675 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 MTMR10Q9NXD2 777 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 C22orf31O95567 290 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 ABL2P42684 1182 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 ZNF132P52740 706 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 ITGA7Q13683 1181 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 NDNQ99608 321 aa15.3■□□□□ 0.04
HMGA2-210ENST00000541363 B3GNT4Q9C0J1 378 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms