RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ITM2BQ9Y287 266 aa9.98□□□□□ -0.81
USP11-211ENST00000489111 ANKRD6Q9Y2G4 727 aa9.98□□□□□ -0.81
USP11-211ENST00000489111 MUC22E2RYF6 1773 aaPredicted RBP9.97□□□□□ -0.81
USP11-211ENST00000489111 A0A087X1B8 175 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 A0A096LPK6 155 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 RGSL1A5PLK6 1076 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 ANTXRLA6NF34 631 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 GOLGA8CPA6NN73 597 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 H0Y858 1186 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 PSMD11O00231 422 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 PHGDHO43175 533 aaKnown RBP9.97□□□□□ -0.81
USP11-211ENST00000489111 GSTA1P08263 222 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 PRSS56P0CW18 603 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 C5AR1P21730 350 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 CRHR1P34998 444 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 P2RY2P41231 377 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 PTGER3P43115 390 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 MAGEA12P43365 314 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 SPINT3P49223 89 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 DCDC1P59894 354 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 IL9RQ01113 521 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 SATB1Q01826 763 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 PTSQ03393 145 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 CNTN1Q12860 1018 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 RALGDSQ12967 914 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 ITGA9Q13797 1035 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 PDE1CQ14123 709 aaPredicted RBP9.97□□□□□ -0.81
USP11-211ENST00000489111 MPP2Q14168 576 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 LRRC14Q15048 493 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 MLF2Q15773 248 aaPredicted RBP9.97□□□□□ -0.81
USP11-211ENST00000489111 CHRNA6Q15825 494 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 ZNF284Q2VY69 593 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 HSF5Q4G112 596 aaPredicted RBP9.97□□□□□ -0.81
USP11-211ENST00000489111 ZNF789Q5FWF6 425 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 EOGTQ5NDL2 527 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 RBM20Q5T481 1227 aaKnown RBP9.97□□□□□ -0.81
USP11-211ENST00000489111 HECTD2Q5U5R9 776 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 PSAPL1Q6NUJ1 521 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 HSD11B1LQ7Z5J1 315 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 CCDC91Q7Z6B0 441 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 ADHFE1Q8IWW8 467 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 PIANPQ8IYJ0 282 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 RBFAQ8N0V3 343 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 GPR26Q8NDV2 337 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 GDAP1Q8TB36 358 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 TCP10LQ8TDR4 215 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 CXorf40AQ8TE69 158 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 LPGAT1Q92604 370 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 OMDQ99983 421 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 SPATA16Q9BXB7 569 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 CLPBQ9H078 707 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 MLXIPLQ9NP71 852 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 NDRG2Q9UN36 371 aaKnown RBP9.97□□□□□ -0.81
USP11-211ENST00000489111 DUSP12Q9UNI6 340 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 CRYL1Q9Y2S2 319 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 DOCK8Q8NF50 2099 aa9.97□□□□□ -0.81
USP11-211ENST00000489111 MYO18AQ92614 2054 aaKnown RBP9.97□□□□□ -0.81
USP11-211ENST00000489111 KIAA1549LQ6ZVL6 1849 aa9.96□□□□□ -0.81
USP11-211ENST00000489111 PLK4O00444 970 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 GAPDHSO14556 408 aaPredicted RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 WNT9AO14904 365 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 AREL1O15033 823 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 MID1O15344 667 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 GPR39O43194 453 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 LZTS3O60299 673 aaPredicted RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 RNASEH2AO75792 299 aaKnown RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 RHOBTB1O94844 696 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 DNTTP04053 509 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 C2P06681 752 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 ZNF7P17097 686 aaPredicted RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 ACRV1P26436 265 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 FMO4P31512 558 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 ETV3P41162 512 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 LIG3P49916 1009 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 CDKN1CP49918 316 aaPredicted RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 KPNA2P52292 529 aaKnown RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 TAS2R39P59534 338 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 RPS14P62263 151 aaKnown RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 SFSWAPQ12872 951 aaKnown RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 ZKSCAN8Q15776 578 aaPredicted RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 DBN1Q16643 649 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 INSCQ1MX18 579 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 TTC31Q49AM3 519 aaPredicted RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 PPM1JQ5JR12 505 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 LVRNQ6Q4G3 990 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 LIPIQ6XZB0 460 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 KYAT3Q6YP21 454 aaKnown RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 ZNF852Q6ZMS4 543 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 SH2D5Q6ZV89 423 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 Q6ZVL8 140 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 TBC1D1Q86TI0 1168 aaPredicted RBP9.96□□□□□ -0.82
USP11-211ENST00000489111 LCA5Q86VQ0 697 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 SERPINA9Q86WD7 417 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 NRSN1Q8IZ57 195 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 NXPE1Q8N323 547 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 PNPLA1Q8N8W4 532 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 CCDC63Q8NA47 563 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 ACVR1CQ8NER5 493 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 RPLP0P6Q8NHW5 317 aa9.96□□□□□ -0.82
USP11-211ENST00000489111 ZNF398Q8TD17 642 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms