RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	ISL2	Q96A47	359 aa		11.17	□□□□□ -0.62
APTX-223	ENST00000479656	TCF12	Q99081	682 aa		11.17	□□□□□ -0.62
APTX-223	ENST00000479656	WRAP53	Q9BUR4	548 aa	Known RBP	11.17	□□□□□ -0.62
APTX-223	ENST00000479656	CAPS2	Q9BXY5	557 aa		11.17	□□□□□ -0.62
APTX-223	ENST00000479656	INTS9	Q9NV88	658 aa	Known RBP	11.17	□□□□□ -0.62
APTX-223	ENST00000479656	NKIRAS1	Q9NYS0	192 aa		11.17	□□□□□ -0.62
APTX-223	ENST00000479656	PKD2L2	Q9NZM6	624 aa		11.17	□□□□□ -0.62
APTX-223	ENST00000479656	SLC17A7	Q9P2U7	560 aa		11.17	□□□□□ -0.62
APTX-223	ENST00000479656	NDRG2	Q9UN36	371 aa	Known RBP	11.17	□□□□□ -0.62
APTX-223	ENST00000479656		A0A1W2PQF6	199 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	UBA6	A0AVT1	1052 aa	Predicted RBP	11.16	□□□□□ -0.62
APTX-223	ENST00000479656	AREL1	O15033	823 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	PHGDH	O43175	533 aa	Known RBP	11.16	□□□□□ -0.62
APTX-223	ENST00000479656	OR1I1	O60431	355 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	C2	P06681	752 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	HOXB2	P14652	356 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	FMO4	P31512	558 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	MMP12	P39900	470 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	ETV3	P41162	512 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	P2RY2	P41231	377 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	MAGEA12	P43365	314 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	CCT5	P48643	541 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	TTPA	P49638	278 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	LIG3	P49916	1009 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	CLCN5	P51795	746 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	TAS2R39	P59534	338 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	RPS14	P62263	151 aa	Known RBP	11.16	□□□□□ -0.62
APTX-223	ENST00000479656	NFATC2	Q13469	925 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	STARD3	Q14849	445 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	HECTD2	Q5U5R9	776 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	ZNF549	Q6P9A3	640 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.16	□□□□□ -0.62
APTX-223	ENST00000479656	RAPH1	Q70E73	1250 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	SNX20	Q7Z614	316 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	SPNS2	Q8IVW8	549 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	CNPY4	Q8N129	248 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	AADAT	Q8N5Z0	425 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	OR2T3	Q8NH03	318 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	RPLP0P6	Q8NHW5	317 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	MSANTD3	Q96H12	275 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	APOPT1	Q96IL0	206 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	PAIP2	Q9BPZ3	127 aa	Known RBP	11.16	□□□□□ -0.62
APTX-223	ENST00000479656	HDAC8	Q9BY41	377 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	MKRN2	Q9H000	416 aa	Known RBP	11.16	□□□□□ -0.62
APTX-223	ENST00000479656	INTS10	Q9NVR2	710 aa	Known RBP	11.16	□□□□□ -0.62
APTX-223	ENST00000479656	CA14	Q9ULX7	337 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	DUSP12	Q9UNI6	340 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656	VWA7	Q9Y334	891 aa		11.16	□□□□□ -0.62
APTX-223	ENST00000479656		A0A096LPK6	155 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	NEMP1	O14524	444 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	MPO	P05164	745 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	ELFN1	P0C7U0	828 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	ITGAL	P20701	1170 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	CRHR1	P34998	444 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	DRD3	P35462	400 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	POLD2	P49005	469 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	CSRP3	P50461	194 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	SLC18A1	P54219	525 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	SLC12A2	P55011	1212 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	WDR4	P57081	412 aa	Known RBP	11.15	□□□□□ -0.62
APTX-223	ENST00000479656	POU4F1	Q01851	419 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	ELP6	Q0PNE2	266 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	CCIN	Q13939	588 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	ZNF460	Q14592	562 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	ACOX1	Q15067	660 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	MLF2	Q15773	248 aa	Predicted RBP	11.15	□□□□□ -0.62
APTX-223	ENST00000479656	AARS2	Q5JTZ9	985 aa	Known RBP	11.15	□□□□□ -0.62
APTX-223	ENST00000479656	ZNF776	Q68DI1	518 aa	Predicted RBP	11.15	□□□□□ -0.62
APTX-223	ENST00000479656	TRMT11	Q7Z4G4	463 aa	Known RBP	11.15	□□□□□ -0.62
APTX-223	ENST00000479656	TECPR1	Q7Z6L1	1165 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	SERPINA9	Q86WD7	417 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	ADHFE1	Q8IWW8	467 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	PLD6	Q8N2A8	252 aa	Known RBP	11.15	□□□□□ -0.62
APTX-223	ENST00000479656	HDDC3	Q8N4P3	179 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	LPGAT1	Q92604	370 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	SCAMP4	Q969E2	229 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	PLEKHG4B	Q96PX9	1271 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	OLFM1	Q99784	485 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	SLC6A17	Q9H1V8	727 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	FAM83D	Q9H4H8	585 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	ZNF358	Q9NW07	568 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	TLK1	Q9UKI8	766 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656	COQ6	Q9Y2Z9	468 aa		11.15	□□□□□ -0.62
APTX-223	ENST00000479656		A0A1W2PP55	124 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	MAN2B1	O00754	1011 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	PFDN6	O15212	129 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	MMP20	O60882	483 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	DNAJC6	O75061	913 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	ZWINT	O95229	277 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	ADH1B	P00325	375 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	STMN1	P16949	149 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	C5AR1	P21730	350 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	SUOX	P51687	545 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	CDKN2D	P55273	166 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	RAB10	P61026	200 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	GNGT1	P63211	74 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	IRF9	Q00978	393 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	ZP2	Q05996	745 aa		11.15	□□□□□ -0.63
APTX-223	ENST00000479656	SEPT7	Q16181	437 aa	Known RBP	11.15	□□□□□ -0.63
APTX-223	ENST00000479656	DBN1	Q16643	649 aa		11.15	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms