RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SLC25A13Q9UJS0 675 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 TLR6Q9Y2C9 796 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 ACTL7AQ9Y615 435 aa11□□□□□ -0.65
COL27A1-204ENST00000477421 LRRC14BA6NHZ5 514 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 ENPP3O14638 875 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 SLC7A4O43246 635 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 SLC25A14O95258 325 aaPredicted RBP10.99□□□□□ -0.65
COL27A1-204ENST00000477421 HCAR3P49019 387 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 DMC1Q14565 340 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 PLCL1Q15111 1095 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 ZBTB6Q15916 424 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 ZNF789Q5FWF6 425 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 GRAMD4Q6IC98 578 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 PGAM4Q8N0Y7 254 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 DHRSXQ8N5I4 330 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 DLG3Q92796 817 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 ZNF558Q96NG5 402 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 WDR6Q9NNW5 1121 aaKnown RBP10.99□□□□□ -0.65
COL27A1-204ENST00000477421 MRPL17Q9NRX2 175 aaKnown RBP10.99□□□□□ -0.65
COL27A1-204ENST00000477421 INVSQ9Y283 1065 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 MYRFQ9Y2G1 1151 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 UGT2B4P06133 528 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 ALPIP09923 528 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 HOXB8P17481 243 aaPredicted RBP10.99□□□□□ -0.65
COL27A1-204ENST00000477421 TYMPP19971 482 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 CCNHP51946 323 aaPredicted RBP10.99□□□□□ -0.65
COL27A1-204ENST00000477421 ACAP2Q15057 778 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 MAPKAPK3Q16644 382 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 TIFABQ6ZNK6 161 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 PAQR9Q6ZVX9 377 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 OTOP2Q7RTS6 562 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 BRSK1Q8TDC3 778 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 CDKN2AIPNLQ96HQ2 116 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 TUBGCP5Q96RT8 1024 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 SMOC2Q9H3U7 446 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 GALPQ9UBC7 116 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 SLC13A4Q9UKG4 626 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 MGAT4DA6NG13 374 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 INSIG1O15503 277 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 HS6ST1O60243 411 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 AOC1P19801 751 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 PRIM2P49643 509 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 ARSDP51689 593 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 DLG1Q12959 904 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 SPDYE7PQ495Y7 208 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 FAM98BQ52LJ0 330 aaKnown RBP10.99□□□□□ -0.65
COL27A1-204ENST00000477421 TNFAIP8L3Q5GJ75 292 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 SPESP1Q6UW49 350 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 RBM44Q6ZP01 1051 aaKnown RBP10.99□□□□□ -0.65
COL27A1-204ENST00000477421 TRMT11Q7Z4G4 463 aaKnown RBP10.99□□□□□ -0.65
COL27A1-204ENST00000477421 SERINC5Q86VE9 423 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 PARP8Q8N3A8 854 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 ATG16L2Q8NAA4 619 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 STYXQ8WUJ0 223 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 CENPIQ92674 756 aaPredicted RBP10.99□□□□□ -0.65
COL27A1-204ENST00000477421 IGSF8Q969P0 613 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 ROGDIQ9GZN7 287 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 RERGLQ9H628 205 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 ZFYVE1Q9HBF4 777 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 C6orf203Q9P0P8 240 aaPredicted RBP10.99□□□□□ -0.65
COL27A1-204ENST00000477421 CFAP97Q9P2B7 532 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 CD84Q9UIB8 345 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 ANAPC2Q9UJX6 822 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 POLR3HQ9Y535 204 aaPredicted RBP10.99□□□□□ -0.65
COL27A1-204ENST00000477421 PTGDR2Q9Y5Y4 395 aa10.99□□□□□ -0.65
COL27A1-204ENST00000477421 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.98□□□□□ -0.65
COL27A1-204ENST00000477421 MBLAC1A4D2B0 266 aaPredicted RBP10.98□□□□□ -0.65
COL27A1-204ENST00000477421 E7ENX8 843 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 CDC7O00311 574 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 MATN2O00339 956 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 DEAF1O75398 565 aaPredicted RBP10.98□□□□□ -0.65
COL27A1-204ENST00000477421 PRAMEF1O95521 474 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 SLC35E2BP0CK96 405 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 EPB42P16452 691 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 EFNA1P20827 205 aaPredicted RBP10.98□□□□□ -0.65
COL27A1-204ENST00000477421 POU1F1P28069 291 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 NDST2P52849 883 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 IRF8Q02556 426 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 IL10RBQ08334 325 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 PWP1Q13610 501 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 KIAA0319Q5VV43 1072 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 ITIH5Q86UX2 942 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 VPS37AQ8NEZ2 397 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 TMEM159Q96B96 161 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 OTULINQ96BN8 352 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 PTCD3Q96EY7 689 aaKnown RBP10.98□□□□□ -0.65
COL27A1-204ENST00000477421 TPD52L3Q96J77 140 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 ASB2Q96Q27 587 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 TRMOQ9BU70 441 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 BDH2Q9BUT1 245 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 ATG10Q9H0Y0 220 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 OSGEPL1Q9H4B0 414 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 MARCH4Q9P2E8 410 aaPredicted RBP10.98□□□□□ -0.65
COL27A1-204ENST00000477421 FAM32AQ9Y421 112 aaKnown RBP10.98□□□□□ -0.65
COL27A1-204ENST00000477421 ZCWPW2A0A1B0GU75 182 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 CCDC189A1A4V9 331 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 SLC22A3O75751 556 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 INHAP05111 366 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 PRSS56P0CW18 603 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 S100A3P33764 101 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms