RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TMCO6Q96DC7 493 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 GRAMD2BQ96HH9 432 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 RADILQ96JH8 1075 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 SH3GL2Q99962 352 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 APOL6Q9BWW8 343 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 AP1M1Q9BXS5 423 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 FOXP1Q9H334 677 aaPredicted RBP5.98□□□□□ -1.45
VPS50-212ENST00000476413 EPB41L5Q9HCM4 733 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 ARHGEF38Q9NXL2 777 aa5.98□□□□□ -1.45
VPS50-212ENST00000476413 WDR91A4D1P6 747 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 INAFM1C9JVW0 142 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 M0QZ24 198 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 SPRY3O43610 288 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 PLRG1O43660 514 aaKnown RBP5.97□□□□□ -1.45
VPS50-212ENST00000476413 PSG1P11464 419 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 ABCG1P45844 678 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 RFX2P48378 723 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 ABATP80404 500 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 KCNC3Q14003 757 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 KYNUQ16719 465 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 ERMARDQ5T6L9 678 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 PXDC1Q5TGL8 231 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 TAOK1Q7L7X3 1001 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 PLPPR4Q7Z2D5 763 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 MCEMP1Q8IX19 187 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 BEST3Q8N1M1 668 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 TMTC2Q8N394 836 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 SYT2Q8N9I0 419 aaPredicted RBP5.97□□□□□ -1.45
VPS50-212ENST00000476413 AVL9Q8NBF6 648 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 RND1Q92730 232 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 ZNF622Q969S3 477 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS50-212ENST00000476413 LRFN5Q96NI6 719 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 BAG1Q99933 345 aaPredicted RBP5.97□□□□□ -1.45
VPS50-212ENST00000476413 MRPL1Q9BYD6 325 aaKnown RBP5.97□□□□□ -1.45
VPS50-212ENST00000476413 MAGIXQ9H6Y5 334 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 CNGB3Q9NQW8 809 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 C5AR2Q9P296 337 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 CPSF2Q9P2I0 782 aaKnown RBP5.97□□□□□ -1.45
VPS50-212ENST00000476413 IL36RNQ9UBH0 155 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 OR14J1Q9UGF5 321 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 SQORQ9Y6N5 450 aa5.97□□□□□ -1.45
VPS50-212ENST00000476413 ZNF644Q9H582 1327 aaPredicted RBP5.97□□□□□ -1.45
VPS50-212ENST00000476413 A0A1B0GVT2 93 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 LRRC72A6NJI9 287 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 B4DGG1 531 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 H7C0S8 307 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 VWA5AO00534 786 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 MAP2K7O14733 419 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 PPEF2O14830 753 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 TNFRSF13BO14836 293 aaPredicted RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 SMAD9O15198 467 aaKnown RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 NDUFS7O75251 213 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 AVILO75366 819 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 MOSPD3O75425 235 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 KCNK5O95279 499 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 MSH2P43246 934 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 ENTPD1P49961 510 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 AIMP1Q12904 312 aaKnown RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 GRIK2Q13002 908 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 C15orf59Q2T9L4 293 aaPredicted RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 DNTTIP2Q5QJE6 756 aaKnown RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 FNBP1LQ5T0N5 605 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 FAM69BQ5VUD6 431 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 OTUD1Q5VV17 481 aaPredicted RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 LCN10Q6JVE6 187 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 C11orf87Q6NUJ2 197 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 COLCA1Q6ZS62 124 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 ZC3HC1Q86WB0 502 aaKnown RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 PTPMT1Q8WUK0 201 aaPredicted RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 APBB2Q92870 758 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 FAM234AQ9H0X4 552 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 OR10A4Q9H209 315 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 OSGEPL1Q9H4B0 414 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 EBF3Q9H4W6 596 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 UBA2Q9UBT2 640 aaPredicted RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 DNAJB4Q9UDY4 337 aa5.96□□□□□ -1.46
VPS50-212ENST00000476413 CFDP1Q9UEE9 299 aaPredicted RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 TTC7AQ9ULT0 858 aaPredicted RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 WBP11Q9Y2W2 641 aaKnown RBP5.96□□□□□ -1.46
VPS50-212ENST00000476413 hCG_1809904A0A1W2PP81 198 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 A0A1W2PPE2 198 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 RPS10-NUDT3A0A1W2PQS6 291 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 A0A1W2PR64 198 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 KANSL1LA0AUZ9 987 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 CPED1A4D0V7 1026 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 DNAJC9-AS1A6NH13 148 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 SOCS2O14508 198 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 TBX10O75333 385 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 GPC4O75487 556 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 SYF2O95926 243 aaKnown RBP5.95□□□□□ -1.46
VPS50-212ENST00000476413 EGFP01133 1207 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 TMEM191BP0C7N4 346 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 PRLRP16471 622 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 LMO1P25800 156 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 APOBEC1P41238 236 aaKnown RBP5.95□□□□□ -1.46
VPS50-212ENST00000476413 NUDT6P53370 316 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 UBXN2AP68543 259 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 LEXMQ3ZCV2 418 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 IGSF11Q5DX21 431 aa5.95□□□□□ -1.46
VPS50-212ENST00000476413 PAPPA-AS1Q5QFB9 102 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms