RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RHOBTB1O94844 696 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 CHRM1P11229 460 aaPredicted RBP18.88■□□□□ 0.61
SMC4-209ENST00000468653 VIPR1P32241 457 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 PTGER3P43115 390 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 DLG1Q12959 904 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 FAM83EQ2M2I3 478 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 C9orf64Q5T6V5 341 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 AGAP9Q5VTM2 703 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 LRRC8EQ6NSJ5 796 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 OTOAQ7RTW8 1153 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 SNX20Q7Z614 316 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 PIM3Q86V86 326 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 C10orf107Q8IVU9 208 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 SUSD6Q92537 303 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 CHFRQ96EP1 664 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 PCDH12Q9NPG4 1184 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 CPSF2Q9P2I0 782 aaKnown RBP18.88■□□□□ 0.61
SMC4-209ENST00000468653 C16orf96A6NNT2 1141 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 ARNTLO00327 626 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 KPNA3O00505 521 aaPredicted RBP18.88■□□□□ 0.61
SMC4-209ENST00000468653 GAPDHSO14556 408 aaPredicted RBP18.88■□□□□ 0.61
SMC4-209ENST00000468653 GPR39O43194 453 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 OR1I1O60431 355 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 LTA4HP09960 611 aaKnown RBP18.88■□□□□ 0.61
SMC4-209ENST00000468653 CCDC166P0CW27 439 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 STX3Q13277 289 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 PDAP1Q13442 181 aaKnown RBP18.88■□□□□ 0.61
SMC4-209ENST00000468653 NFATC2Q13469 925 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 HTR4Q13639 388 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 KLC3Q6P597 504 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 FSTL5Q8N475 847 aaPredicted RBP18.88■□□□□ 0.61
SMC4-209ENST00000468653 RDH11Q8TC12 318 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 CSGALNACT1Q8TDX6 532 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 HEXDCQ8WVB3 486 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 SREK1Q8WXA9 508 aaKnown RBP18.88■□□□□ 0.61
SMC4-209ENST00000468653 UNKQ9C0B0 810 aaKnown RBP18.88■□□□□ 0.61
SMC4-209ENST00000468653 TMEM245Q9H330 911 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 POPDC3Q9HBV1 291 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 TAS2R13Q9NYV9 303 aa18.88■□□□□ 0.61
SMC4-209ENST00000468653 THAP10Q9P2Z0 257 aaPredicted RBP18.88■□□□□ 0.61
SMC4-209ENST00000468653 COL4A3Q01955 1670 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 DENND4AQ7Z401 1863 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 GOLGA8CPA6NN73 597 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 H3BQ06 376 aaPredicted RBP18.87■□□□□ 0.61
SMC4-209ENST00000468653 MYL2P10916 166 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 PKMP14618 531 aaKnown RBP18.87■□□□□ 0.61
SMC4-209ENST00000468653 ZNF30P17039 623 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 BST1Q10588 318 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 ELAVL3Q14576 367 aaKnown RBP18.87■□□□□ 0.61
SMC4-209ENST00000468653 CHRNA6Q15825 494 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 LYPLAL1Q5VWZ2 237 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 ZDHHC20Q5W0Z9 365 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 CGB2Q6NT52 195 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 ZCCHC23Q6ZST2 131 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 SERPINA9Q86WD7 417 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 GPR26Q8NDV2 337 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 ZNF398Q8TD17 642 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 GPR78Q96P69 363 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 IGSF5Q9NSI5 407 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 PKD2L2Q9NZM6 624 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 CRLS1Q9UJA2 301 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 KIAA1549LQ6ZVL6 1849 aa18.87■□□□□ 0.61
SMC4-209ENST00000468653 A0A1W2PPC1 479 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 ANHXE9PGG2 379 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 TK2O00142 265 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 C1SP09871 688 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 UGT1A6P19224 532 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 UGT1A1P22309 533 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 UGT1A4P22310 534 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 UGT1A3P35503 534 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 UGT1A5P35504 534 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 SLC26A3P40879 764 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 SOX9P48436 509 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 SUOXP51687 545 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 GPR33Q49SQ1 333 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 ERAP2Q6P179 960 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 TMIEQ8NEW7 156 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 FAM136AQ96C01 138 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 UBXN10Q96LJ8 280 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 FAM161BQ96MY7 647 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 BIRC8Q96P09 236 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 GAS2L1Q99501 681 aaPredicted RBP18.86■□□□□ 0.61
SMC4-209ENST00000468653 MRPL57Q9BQC6 102 aaKnown RBP18.86■□□□□ 0.61
SMC4-209ENST00000468653 SUN2Q9UH99 717 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 FAM50BQ9Y247 325 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 REV3LO60673 3130 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 BPTFQ12830 3046 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 TNRC18O15417 2968 aaPredicted RBP18.86■□□□□ 0.61
SMC4-209ENST00000468653 G3V2L1 256 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 SERPINE1P05121 402 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 PYGLP06737 847 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 TROVE2P10155 538 aaKnown RBP eCLIP18.86■□□□□ 0.611e-12■■■■■ 61.2
SMC4-209ENST00000468653 RALBP11234 206 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 FGF3P11487 239 aaPredicted RBP18.86■□□□□ 0.61
SMC4-209ENST00000468653 ZNF7P17097 686 aaPredicted RBP18.86■□□□□ 0.61
SMC4-209ENST00000468653 IL12RB1P42701 662 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 SPINT3P49223 89 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 TIAL1Q01085 375 aaKnown RBP eCLIP18.86■□□□□ 0.61
SMC4-209ENST00000468653 EGFLAMQ63HQ2 1017 aa18.86■□□□□ 0.61
SMC4-209ENST00000468653 TMEM207Q6UWW9 146 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms