RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 HSPA1AP0DMV8 641 aaKnown RBP14.13□□□□□ -0.15
LIMD1-202ENST00000440097 HSPA1BP0DMV9 641 aaKnown RBP14.13□□□□□ -0.15
LIMD1-202ENST00000440097 COX4I1P13073 169 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 TNK2Q07912 1038 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 FAM83EQ2M2I3 478 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 C6orf52Q5T4I8 152 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 CXorf57Q6NSI4 855 aaKnown RBP14.13□□□□□ -0.15
LIMD1-202ENST00000440097 MRNIPQ6NTE8 343 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 TPGS1Q6ZTW0 290 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 HS6ST3Q8IZP7 471 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 HEXDCQ8WVB3 486 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 TADA1Q96BN2 335 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 OLFM1Q99784 485 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 MFSD1Q9H3U5 465 aa14.13□□□□□ -0.15
LIMD1-202ENST00000440097 UBA6A0AVT1 1052 aaPredicted RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 CD3EAPO15446 510 aaKnown RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 TRMUO75648 421 aaKnown RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 COL6A2P12110 1019 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 MYL4P12829 197 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 LEPRP48357 1165 aaKnown RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 CLCN5P51795 746 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 KPNA2P52292 529 aaKnown RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 ZXDBP98169 803 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 SFSWAPQ12872 951 aaKnown RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 RARS2Q5T160 578 aaKnown RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 HECTD2Q5U5R9 776 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 LIPMQ5VYY2 423 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 FBXO46Q6PJ61 603 aaPredicted RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 ZYG11AQ6WRX3 759 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 RYBPQ8N488 228 aaPredicted RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 TDRD5Q8NAT2 981 aaKnown RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 HJURPQ8NCD3 748 aaPredicted RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 TSPAN17Q96FV3 270 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 LRGUKQ96M69 825 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 SMIM14Q96QK8 99 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 MRPL46Q9H2W6 279 aaKnown RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 DNAJC28Q9NX36 388 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 ARHGAP26Q9UNA1 814 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 A0A087X1B8 175 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 A0A1W2PRU2 124 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 CCDC162PA2VCL2 907 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 C8AP07357 584 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 CHRNGP07510 517 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 CCR10P46092 362 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 POLD2P49005 469 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 RHOAP61586 193 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 ARF5P84085 180 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 APOFQ13790 326 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 RFTN1Q14699 578 aaPredicted RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 ZNF554Q86TJ5 538 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 ELMOD1Q8N336 334 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 RDH11Q8TC12 318 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 CORO1BQ9BR76 489 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 TM6SF2Q9BZW4 377 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 ILKAPQ9H0C8 392 aaPredicted RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 RETREG1Q9H6L5 497 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 CYP4F12Q9HCS2 524 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 MAN1C1Q9NR34 630 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 FCF1Q9Y324 198 aaKnown RBP14.12□□□□□ -0.15
LIMD1-202ENST00000440097 VWA7Q9Y334 891 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 RAI2Q9Y5P3 530 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 COL4A6Q14031 1691 aa14.12□□□□□ -0.15
LIMD1-202ENST00000440097 RPP40O75818 363 aaKnown RBP14.11□□□□□ -0.15
LIMD1-202ENST00000440097 FAM58BPP0C7Q3 252 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 MRPS22P82650 360 aaKnown RBP14.11□□□□□ -0.15
LIMD1-202ENST00000440097 CYTH1Q15438 398 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 AGAP9Q5VTM2 703 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 GAREM2Q75VX8 874 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 AMIGO2Q86SJ2 522 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 DNAJC5GQ8N7S2 189 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 OR4K2Q8NGD2 314 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 OR6K2Q8NGY2 324 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 OR4L1Q8NH43 312 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 HSPBAP1Q96EW2 488 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 CATSPERZQ9NTU4 200 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 CFAP97Q9P2B7 532 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 CEPT1Q9Y6K0 416 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 A0A1B0GTW7 788 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 C2orf81A6NN90 581 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 ZNF195O14628 629 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 ZBTB14O43829 449 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 H2AFYO75367 372 aaKnown RBP14.11□□□□□ -0.15
LIMD1-202ENST00000440097 SBK3P0C264 359 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 CD1EP15812 388 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 CSKP41240 450 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 MAGEA10P43363 369 aaPredicted RBP14.11□□□□□ -0.15
LIMD1-202ENST00000440097 PLK1P53350 603 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 CDKL1Q00532 357 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 ADGRE1Q14246 886 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 TRIM67Q6ZTA4 783 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 PIM3Q86V86 326 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 GALNT4Q8N4A0 578 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 TMEM151AQ8N4L1 468 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 STYXQ8WUJ0 223 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 FEM1AQ9BSK4 669 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 ADGRE3Q9BY15 652 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 SMG9Q9H0W8 520 aaKnown RBP14.11□□□□□ -0.15
LIMD1-202ENST00000440097 COG4Q9H9E3 785 aa14.11□□□□□ -0.15
LIMD1-202ENST00000440097 COPS7BQ9H9Q2 264 aaPredicted RBP14.11□□□□□ -0.15
LIMD1-202ENST00000440097 IL21Q9HBE4 155 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms