RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 ZNF30P17039 623 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 AMPD1P23109 780 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 TEAD1P28347 426 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 ETV3P41162 512 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 NOP2P46087 812 aaKnown RBP6.78□□□□□ -1.32
ERCC8-203ENST00000439176 ATP1A2P50993 1020 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 MAPK10P53779 464 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 GDF10P55107 478 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 CDK3Q00526 305 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 ZFP36L1Q07352 338 aaKnown RBP6.78□□□□□ -1.32
ERCC8-203ENST00000439176 LY6DQ14210 128 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 NFKBIBQ15653 356 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 CNGA3Q16281 694 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 AMZ1Q400G9 498 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 FIGNQ5HY92 759 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 KIAA1614Q5VZ46 1190 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 ZNF385CQ66K41 422 aaPredicted RBP6.78□□□□□ -1.32
ERCC8-203ENST00000439176 TIGD7Q6NT04 549 aaPredicted RBP6.78□□□□□ -1.32
ERCC8-203ENST00000439176 PRICKLE2Q7Z3G6 844 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 MAP7D3Q8IWC1 876 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 GPBAR1Q8TDU6 330 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 TTC9Q92623 222 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 SYN2Q92777 582 aaPredicted RBP6.78□□□□□ -1.32
ERCC8-203ENST00000439176 AP2M1Q96CW1 435 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 DTD2Q96FN9 168 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 SCRN2Q96FV2 425 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 CALR3Q96L12 384 aaKnown RBP6.78□□□□□ -1.32
ERCC8-203ENST00000439176 COQ10AQ96MF6 247 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 CSPG4P5Q96PW8 444 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 MGME1Q9BQP7 344 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 ANP32EQ9BTT0 268 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 LGR4Q9BXB1 951 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 POLR1EQ9GZS1 481 aaKnown RBP6.78□□□□□ -1.32
ERCC8-203ENST00000439176 ISCUQ9H1K1 167 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 STN1Q9H668 368 aaKnown RBP6.78□□□□□ -1.32
ERCC8-203ENST00000439176 TAAR2Q9P1P5 351 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 RCOR3Q9P2K3 495 aaPredicted RBP6.78□□□□□ -1.32
ERCC8-203ENST00000439176 LCMT1Q9UIC8 334 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 ANAPC7Q9UJX3 599 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 DYRK1BQ9Y463 629 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 HEMK1Q9Y5R4 338 aaPredicted RBP6.78□□□□□ -1.32
ERCC8-203ENST00000439176 UNC13CQ8NB66 2214 aa6.78□□□□□ -1.32
ERCC8-203ENST00000439176 A0A1B0GTH6 734 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 PMS2P1A4D2B8 440 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 STMND1H3BQB6 276 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 ECEL1O95672 775 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 SERPING1P05155 500 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 FGF1P05230 155 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 CEACAM5P06731 702 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 TPM3P06753 285 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 IVLP07476 585 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 SKILP12757 684 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 HGFP14210 728 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 CR2P20023 1033 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 MX2P20592 715 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 CSTF2P33240 577 aaKnown RBP eCLIP6.77□□□□□ -1.33
ERCC8-203ENST00000439176 MAN1A1P33908 653 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 ACTR1BP42025 376 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 ACTR1AP61163 376 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 MAXP61244 160 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 GPLD1P80108 840 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 DPTQ07507 201 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 POU4F2Q12837 409 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 TRA2AQ13595 282 aaKnown RBP eCLIP6.77□□□□□ -1.33
ERCC8-203ENST00000439176 LRP8Q14114 963 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 NR1I3Q14994 352 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 IFI16Q16666 785 aaKnown RBP6.77□□□□□ -1.33
ERCC8-203ENST00000439176 ZFYVE27Q5T4F4 411 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 SLC30A9Q6PML9 568 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 PCSK4Q6UW60 755 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 ADAMTSL4Q6UY14 1074 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 Q6ZVL8 140 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 CYP4V2Q6ZWL3 525 aaPredicted RBP6.77□□□□□ -1.33
ERCC8-203ENST00000439176 HSD11B1LQ7Z5J1 315 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 NLRP8Q86W28 1048 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 GALNT13Q8IUC8 556 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 RAVER1Q8IY67 606 aaKnown RBP6.77□□□□□ -1.33
ERCC8-203ENST00000439176 NRSN1Q8IZ57 195 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 NIPA2Q8N8Q9 360 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 KCTD6Q8NC69 237 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 AGBL5Q8NDL9 886 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 EXD1Q8NHP7 514 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 CCL4L1Q8NHW4 92 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 USP7Q93009 1102 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 AHCYL2Q96HN2 611 aaKnown RBP6.77□□□□□ -1.33
ERCC8-203ENST00000439176 ZNF830Q96NB3 372 aaPredicted RBP6.77□□□□□ -1.33
ERCC8-203ENST00000439176 OR2M4Q96R27 311 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 TAAR9Q96RI9 348 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 MCCC1Q96RQ3 725 aaPredicted RBP6.77□□□□□ -1.33
ERCC8-203ENST00000439176 SLC38A3Q99624 504 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 SEMA3CQ99985 751 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 NUP85Q9BW27 656 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 FRMD8Q9BZ67 464 aaPredicted RBP6.77□□□□□ -1.33
ERCC8-203ENST00000439176 ASPSCR1Q9BZE9 553 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 TRIM7Q9C029 511 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 RDH14Q9HBH5 336 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 NT5MQ9NPB1 228 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 SPATS2LQ9NUQ6 558 aaKnown RBP6.77□□□□□ -1.33
ERCC8-203ENST00000439176 KCNK4Q9NYG8 393 aa6.77□□□□□ -1.33
ERCC8-203ENST00000439176 AMACRQ9UHK6 382 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms