RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 A0A0J9YYE9 177 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC12A8A0AV02 714 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 UBA6A0AVT1 1052 aaPredicted RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 ARHGAP10A1A4S6 786 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 ZNF189O75820 626 aaPredicted RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 FAM58BPP0C7Q3 252 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 RHOQP17081 205 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 RPL5P46777 297 aaKnown RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 POLD2P49005 469 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 INHBCP55103 352 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 STX5Q13190 355 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 CHERPQ8IWX8 916 aaKnown RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 OR7D4Q8NG98 312 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 VPS33AQ96AX1 596 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 ELAC1Q9H777 363 aaKnown RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 EML4Q9HC35 981 aaKnown RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 UTP6Q9NYH9 597 aaKnown RBP13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 PCDH10Q9P2E7 1040 aa13.45□□□□□ -0.26
GTF2F1-201ENST00000394456 CDC7O00311 574 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 CD3EAPO15446 510 aaKnown RBP13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 ADAM12O43184 909 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC7A4O43246 635 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 SRP72O76094 671 aaKnown RBP13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 RTN3O95197 1032 aaPredicted RBP13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 CLIC3O95833 236 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 GNRH1P01148 92 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 CAPNS1P04632 268 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 GALTP07902 379 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 PSMC3P17980 439 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 FDXRP22570 491 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 OXTRP30559 389 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 FMO4P31512 558 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 MAGEA11P43364 429 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 HERVK_113P63132 956 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 POLD3Q15054 466 aaPredicted RBP13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 UGT3A1Q6NUS8 523 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 MSANTD2Q6P1R3 559 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 C8orf82Q6P1X6 216 aaPredicted RBP13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 PAQR3Q6TCH7 311 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 ARHGAP18Q8N392 663 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 TWIST2Q8WVJ9 160 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 DLG3Q92796 817 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 ERVK-6Q9BXR3 956 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 TMEM248Q9NWD8 314 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 MARCH2Q9P0N8 246 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 SLAMF8Q9P0V8 285 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 AURKCQ9UQB9 309 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 MED16Q9Y2X0 877 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 TCRBV3S1A0A5B6 114 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 OR6C75A6NL08 312 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 MTHFD1P11586 935 aaKnown RBP13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 NCK1P16333 377 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 DNAJB1P25685 340 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 OR1E1P30953 314 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 KPNA2P52292 529 aaKnown RBP13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 APOFQ13790 326 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 AAK1Q2M2I8 961 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 IFNEQ86WN2 208 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 NPAS4Q8IUM7 802 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 CALML6Q8TD86 181 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 HBEGFQ99075 208 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 ACOX2Q99424 681 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 CAAP1Q9H8G2 361 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 SARDHQ9UL12 918 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 COMMD3-BMI1R4GMX3 469 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 V9GYQ6 96 aa13.44□□□□□ -0.26
GTF2F1-201ENST00000394456 LOC285095A0A1B0GVY8 99 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 WASH4PA8MWX3 477 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 FXYD1O00168 92 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 RAMP2O60895 175 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 COL6A1P12109 1028 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 ZNF37AP17032 561 aaPredicted RBP13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 GPR17Q13304 367 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 TSNQ15631 228 aaKnown RBP13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 RABL3Q5HYI8 236 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 PHYKPLQ8IUZ5 450 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 AHI1Q8N157 1196 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 TMEM79Q9BSE2 394 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 ZNF696Q9H7X3 374 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 DUS2Q9NX74 493 aaKnown RBP13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 CMTM6Q9NX76 183 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 AKAP10O43572 662 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 OR1I1O60431 355 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 TSPAN3O60637 253 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 CLASP2O75122 1294 aaKnown RBP13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 TNFAIP8O95379 198 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 GLP2RO95838 553 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 GFAPP14136 432 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 EEF1DP29692 281 aaKnown RBP13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 NDST2P52849 883 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 PRKCQQ04759 706 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 SERINC3Q13530 473 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 EPHX4Q8IUS5 362 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 DGCR14Q96DF8 476 aaKnown RBP13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 L3HYPDHQ96EM0 354 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 CCDC97Q96F63 343 aaPredicted RBP13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 TSPAN17Q96FV3 270 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 C1orf74Q96LT6 269 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC25A23Q9BV35 468 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms