RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 SLC12A1Q13621 1099 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 C21orf62-AS1Q17RA5 79 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 SPDYAQ5MJ70 313 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 ADGRF1Q5T601 910 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CEP68Q76N32 757 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 ZNF683Q8IZ20 524 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 APCDD1Q8J025 514 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CEP70Q8NHQ1 597 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 DPF3Q92784 378 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 LUZP4Q9P127 313 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 G3V2L1 256 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 TRIM24O15164 1050 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 SMAD6O43541 496 aaKnown RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 TGM5O43548 720 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 FGF18O76093 207 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 SUPT7LO94864 414 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 GLP2RO95838 553 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 GSTA1P08263 222 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 HSD17B2P37059 387 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 HADHAP40939 763 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CSKP41240 450 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 STK19P49842 368 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 WDR5P61964 334 aaKnown RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 LRRC8EQ6NSJ5 796 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 REM2Q8IYK8 340 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CMTM8Q8IZV2 173 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 ZNF366Q8N895 744 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 FAM13CQ8NE31 585 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CATSPER2Q96P56 530 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 SORT1Q99523 831 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 TAS2R1Q9NYW7 299 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 INSL5Q9Y5Q6 135 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 NYNRINQ9P2P1 1898 aaKnown RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 NLRC5Q86WI3 1866 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 LCHNA4D1U4 455 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 HIDE1A8MVS5 230 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 AIM2O14862 343 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 PSMD3O43242 534 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 DLX3O60479 287 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 PRAMEF11O60813 436 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 TIPRLO75663 272 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 SIX3O95343 332 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 PRAMEF12O95522 483 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 TFEBP19484 476 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 TCN1P20061 433 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 HOXD9P28356 352 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 PGM1P36871 562 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 MASP1P48740 699 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 NTHL1P78549 312 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 IL10RBQ08334 325 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 SEMA3AQ14563 771 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 PARP15Q460N3 678 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 RALGPS1Q5JS13 557 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 ARTNQ5T4W7 220 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CLEC6AQ6EIG7 209 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CFAP161Q6P656 301 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CNKSR3Q6P9H4 555 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 BEND5Q7L4P6 421 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 MAVSQ7Z434 540 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 BBS7Q8IWZ6 715 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 RBM15BQ8NDT2 890 aaKnown RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CFAP61Q8NHU2 1237 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 GPR22Q99680 433 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CADM1Q9BY67 442 aaKnown RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 ARNT2Q9HBZ2 717 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 ENAMQ9NRM1 1142 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 NKX1-2Q9UD57 310 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 ZDHHC2Q9UIJ5 367 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CCL26Q9Y258 94 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 RAI2Q9Y5P3 530 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 ATXN2Q99700 1313 aaKnown RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 PPP6CO00743 305 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 ZBTB14O43829 449 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 TBC1D4O60343 1298 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 TMCC1O94876 653 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 BAG2O95816 211 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 C8AP07357 584 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 MYOGP15173 224 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 HAAOP46952 286 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 RASSF2P50749 326 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 KPNB1Q14974 876 aaKnown RBP10.78□□□□□ -0.68
NEDD9-201ENST00000379433 UGP2Q16851 508 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 LRRC36Q1X8D7 754 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 CEP78Q5JTW2 689 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 HABP4Q5JVS0 413 aaKnown RBP10.78□□□□□ -0.68
NEDD9-201ENST00000379433 ARMC12Q5T9G4 340 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 HECTD2Q5U5R9 776 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 SCML4Q8N228 414 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 TEX9Q8N6V9 391 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 TCF12Q99081 682 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 ZDHHC4Q9NPG8 344 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 ARHGEF3Q9NR81 526 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 VTI1BQ9UEU0 232 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 SATB2Q9UPW6 733 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 PTPRDP23468 1912 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 CCDC163A0A0D9SF12 145 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 TYW5A2RUC4 315 aaKnown RBP10.78□□□□□ -0.68
NEDD9-201ENST00000379433 KRBA1A5PL33 1030 aa10.78□□□□□ -0.68
NEDD9-201ENST00000379433 CD3EAPO15446 510 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms