RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 FNDC3AQ9Y2H6 1198 aaKnown RBP6.95□□□□□ -1.3
PTCD2-201ENST00000308077 PKP3Q9Y446 797 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 CKAP5Q14008 2032 aa6.95□□□□□ -1.3
PTCD2-201ENST00000308077 LRRK1Q38SD2 2015 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 K7EQS6 105 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 TM9SF1O15321 606 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 PHGDHO43175 533 aaKnown RBP6.94□□□□□ -1.3
PTCD2-201ENST00000308077 APODP05090 189 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 C1SP09871 688 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 DHRS4L1P0CG22 281 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 BPIP17213 487 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 SAT1P21673 171 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 CRHR1P34998 444 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 HADHAP40939 763 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 STC1P52823 247 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 SEC24CP53992 1094 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 PTSQ03393 145 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF460Q14592 562 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 ZKSCAN8Q15776 578 aaPredicted RBP6.94□□□□□ -1.3
PTCD2-201ENST00000308077 FASTKD1Q53R41 847 aaKnown RBP6.94□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF805Q5CZA5 627 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF549Q6P9A3 640 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 SERPINA13PQ6UXR4 307 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 RFLNAQ6ZTI6 216 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 USP45Q70EL2 814 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 PARS2Q7L3T8 475 aaKnown RBP6.94□□□□□ -1.3
PTCD2-201ENST00000308077 CLEC14AQ86T13 490 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 PLD6Q8N2A8 252 aaKnown RBP6.94□□□□□ -1.3
PTCD2-201ENST00000308077 GPATCH11Q8N954 259 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 CSGALNACT1Q8TDX6 532 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 UCMAQ8WVF2 138 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 CKAP2Q8WWK9 683 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 ARRDC3Q96B67 414 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 ELMO2Q96JJ3 720 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 NDNQ99608 321 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 OLFM1Q99784 485 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 OMDQ99983 421 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 P2RY13Q9BPV8 354 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 OSBPL1AQ9BXW6 950 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 KCNK12Q9HB15 430 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF358Q9NW07 568 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 KCNK4Q9NYG8 393 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 EMCNQ9ULC0 261 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 PLLPQ9Y342 182 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 MTF2Q9Y483 593 aaPredicted RBP6.94□□□□□ -1.3
PTCD2-201ENST00000308077 PLXNA2O75051 1894 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 CACNA1HO95180 2353 aa6.94□□□□□ -1.3
PTCD2-201ENST00000308077 A0A096LPK6 155 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 A0A1W2PQ67 120 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 C16orf96A6NNT2 1141 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 A6NNZ2 444 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 UPK3BL1B0FP48 263 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 UPK3BL2E5RIL1 263 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 SPECC1L-ADORA2AF8WAN1 911 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 SPINT1O43278 529 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 C2P06681 752 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 SLC35E2BP0CK96 405 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 HNRNPLP14866 589 aaKnown RBP eCLIP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 CTHP32929 405 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 KIR2DL1P43626 348 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 CLCN5P51795 746 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 TAS2R39P59534 338 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 TIAL1Q01085 375 aaKnown RBP eCLIP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 ENPP2Q13822 863 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 USP10Q14694 798 aaKnown RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 SKIV2LQ15477 1246 aaKnown RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 TUBB8Q3ZCM7 444 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 SOWAHCQ53LP3 525 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 ZRANB3Q5FWF4 1079 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 HECTD2Q5U5R9 776 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 MRNIPQ6NTE8 343 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 C16orf46Q6P387 395 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 FAM151BQ6UXP7 276 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF771Q7L3S4 317 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 TAX1BP1Q86VP1 789 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 GPR26Q8NDV2 337 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 GABPB2Q8TAK5 448 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 PIP4K2CQ8TBX8 421 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 OR8D1Q8WZ84 308 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 CCDC97Q96F63 343 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 LRIG1Q96JA1 1093 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF317Q96PQ6 595 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 PAIP2Q9BPZ3 127 aaKnown RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 C19orf43Q9BQ61 176 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 VPS11Q9H270 941 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 PCDH12Q9NPG4 1184 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 IL26Q9NPH9 171 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 PRSS16Q9NQE7 514 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 DKK3Q9UBP4 350 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 LIMD1Q9UGP4 676 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 PPM1HQ9ULR3 514 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 CRYL1Q9Y2S2 319 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 STARD13Q9Y3M8 1113 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 ATG2BQ96BY7 2078 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 PLK4O00444 970 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 KPNA3O00505 521 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 OR1I1O60431 355 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 GLRA3O75311 464 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 SRP72O76094 671 aaKnown RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 PRNPP04156 253 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms