RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 B2RBV5 119 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 PFDN6O15212 129 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 JUNP05412 331 aaKnown RBP16.55■□□□□ 0.24
CCDC40-201ENST00000269318 POU2F2P09086 479 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 MTHFD2P13995 350 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 HNRNPLP14866 589 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCDC40-201ENST00000269318 SERPINA4P29622 427 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 PTGER3P43115 390 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 SNRPD1P62314 119 aaKnown RBP16.55■□□□□ 0.24
CCDC40-201ENST00000269318 KDSRQ06136 332 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 MYLK3Q32MK0 819 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 ECHDC3Q96DC8 303 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 LYSMD1Q96S90 227 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 GPR21Q99679 349 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 OSBPL1AQ9BXW6 950 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 NUF2Q9BZD4 464 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 P2RY12Q9H244 342 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 MTIF3Q9H2K0 278 aaKnown RBP16.55■□□□□ 0.24
CCDC40-201ENST00000269318 WDR55Q9H6Y2 383 aaPredicted RBP16.55■□□□□ 0.24
CCDC40-201ENST00000269318 ZDHHC7Q9NXF8 308 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 TBC1D14Q9P2M4 693 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 GALPQ9UBC7 116 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 GBF1Q92538 1859 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 CHD9Q3L8U1 2897 aa16.55■□□□□ 0.24
CCDC40-201ENST00000269318 C1orf232A0A0U1RR37 186 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 TMEM233B4DJY2 109 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 E9PBE3 544 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 SPECC1L-ADORA2AF8WAN1 911 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 PER2O15055 1255 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 KLHL41O60662 606 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 WFS1O76024 890 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 PABPC1P11940 636 aaKnown RBP16.54■□□□□ 0.24
CCDC40-201ENST00000269318 TYRP14679 529 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 SULT2A1Q06520 285 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 SH2D4BQ5SQS7 431 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 ZNF678Q5SXM1 525 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 ZNF697Q5TEC3 545 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 TMPRSS6Q8IU80 811 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 PHTF2Q8N3S3 785 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 RYBPQ8N488 228 aaPredicted RBP16.54■□□□□ 0.24
CCDC40-201ENST00000269318 RBM15BQ8NDT2 890 aaKnown RBP16.54■□□□□ 0.24
CCDC40-201ENST00000269318 KIAA1191Q96A73 305 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 TUBGCP5Q96RT8 1024 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 SLC30A3Q99726 388 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 CEP44Q9C0F1 390 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 TNFRSF12AQ9NP84 129 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.54■□□□□ 0.24
CCDC40-201ENST00000269318 IKZF3Q9UKT9 509 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 SCN8AQ9UQD0 1980 aa16.54■□□□□ 0.24
CCDC40-201ENST00000269318 GOLGA8QA0A0J9YX86 632 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 GOLGA8OA6NCC3 632 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 GOLGA8NF8WBI6 632 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 NIPSNAP2O75323 286 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 ESR1P03372 595 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 PYGLP06737 847 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 TPBGLP0DKB5 382 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 CEBPBP17676 345 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 NCF2P19878 526 aaPredicted RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 EPHA3P29320 983 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 ATP6V0D1P61421 351 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 LSM12Q3MHD2 195 aaKnown RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 LY6G5CQ5SRR4 150 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 RPS27LQ71UM5 84 aaKnown RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 TAS2R42Q7RTR8 314 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 ADIPOR2Q86V24 386 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 ADGRG2Q8IZP9 1017 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 STK40Q8N2I9 435 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 GIMAP7Q8NHV1 300 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 MAGEC3Q8TD91 643 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 KCNJ9Q92806 393 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 TRMOQ9BU70 441 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 C1orf21Q9H246 121 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 MMADHCQ9H3L0 296 aaPredicted RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 MARK1Q9P0L2 795 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 ZMYM5Q9UJ78 669 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 COMMD10Q9Y6G5 202 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 SLC30A1Q9Y6M5 507 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 MYOFQ9NZM1 2061 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 ZNF106Q9H2Y7 1883 aaKnown RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 GRXCR1A8MXD5 290 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 KERAO60938 352 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 SMIM24O75264 130 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 VPS26AO75436 327 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 CLDN7O95471 211 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 TSPAN12O95859 305 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 CA5AP35218 305 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 HERVK_113P63132 956 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 RAD51Q06609 339 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 UNC50Q53HI1 259 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 FAM109BQ6ICB4 259 aaPredicted RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 ELMSAN1Q6PJG2 1045 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 CERS6Q6ZMG9 384 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 KIAA0907Q7Z7F0 614 aaPredicted RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 CUZD1Q86UP6 607 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 PCDH20Q8N6Y1 951 aaKnown RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 ZNF557Q8N988 423 aaPredicted RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 CD200R1Q8TD46 325 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 MAELQ96JY0 434 aaKnown RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 CCDC28BQ9BUN5 200 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 ERVK-6Q9BXR3 956 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms