RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 RFLNAQ6ZTI6 216 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 TECPR1Q7Z6L1 1165 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 TSPAN33Q86UF1 283 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 FAM129CQ86XR2 697 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 SLC37A2Q8TED4 501 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 RTP4Q96DX8 246 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 SCRN2Q96FV2 425 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 NUDCD1Q96RS6 583 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 MGME1Q9BQP7 344 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 TRIM7Q9C029 511 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 NUP62CLQ9H1M0 184 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 NOD2Q9HC29 1040 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 CWC15Q9P013 229 aaKnown RBP9.93□□□□□ -0.82
LIG1-209ENST00000596104 PHTF1Q9UMS5 762 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 PPIL1Q9Y3C6 166 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 NBASA2RRP1 2371 aa9.93□□□□□ -0.82
LIG1-209ENST00000596104 A0A0U1RQS6 177 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 LOC101059948A0A1B0GTJ6 334 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 GOLGA6CA6NDK9 693 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 GOLGA6BA6NDN3 693 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 TMEM191CA6NGB0 347 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 LGALS16A8MUM7 142 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 PGLSO95336 258 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 EML2O95834 649 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 NTRK1P04629 796 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 GOLGA6DP0CG33 693 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 CYP2A6P11509 494 aaPredicted RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 GP1BBP13224 206 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 DESP17661 470 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 OAS2P29728 719 aaKnown RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 MIPP30301 263 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 HSPA9P38646 679 aaKnown RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 ZNF135P52742 658 aaPredicted RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 COPB1P53618 953 aaKnown RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 MC2RQ01718 297 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 CDC20Q12834 499 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 ZNF235Q14590 738 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 PPP6R3Q5H9R7 873 aaPredicted RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 DOK6Q6PKX4 331 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 ADAMTSL4Q6UY14 1074 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 TIPARPQ7Z3E1 657 aaKnown RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 ARHGAP22Q7Z5H3 698 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 TRIM74Q86UV6 250 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 ZNF761Q86XN6 746 aaPredicted RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 PSTKQ8IV42 348 aaKnown RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 NLGN4XQ8N0W4 816 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 SFRP1Q8N474 314 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 LZTR1Q8N653 840 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 NLGN4YQ8NFZ3 816 aaPredicted RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 NEK11Q8NG66 645 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 C9orf43Q8TAL5 461 aaPredicted RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 PDCD6IPQ8WUM4 868 aaKnown RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 TEFMQ96QE5 360 aaKnown RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 GPN2Q9H9Y4 310 aaPredicted RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 ZNF71Q9NQZ8 489 aaPredicted RBP9.92□□□□□ -0.82
LIG1-209ENST00000596104 PARVAQ9NVD7 372 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 FANCLQ9NW38 375 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 GOLGA6AQ9NYA3 693 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 TMEM98Q9Y2Y6 226 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 ANKRD36A6QL64 1941 aa9.92□□□□□ -0.82
LIG1-209ENST00000596104 ARHGEF17Q96PE2 2063 aaPredicted RBP9.91□□□□□ -0.82
LIG1-209ENST00000596104 ATMINO43313 823 aaPredicted RBP9.91□□□□□ -0.82
LIG1-209ENST00000596104 PRPSAP2O60256 369 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 FZD6O60353 706 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 MAFKO60675 156 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 LRCH4O75427 683 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 MAP3K6O95382 1288 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 TPM2P07951 284 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 PRKAR1AP10644 381 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 CTPS1P17812 591 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 MAP4P27816 1152 aaKnown RBP9.91□□□□□ -0.82
LIG1-209ENST00000596104 GPR1P46091 355 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 MAXP61244 160 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 LRP8Q14114 963 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 WDR74Q6RFH5 385 aaPredicted RBP9.91□□□□□ -0.82
LIG1-209ENST00000596104 USP45Q70EL2 814 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 ZNF765Q7L2R6 523 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 APTXQ7Z2E3 356 aaKnown RBP9.91□□□□□ -0.82
LIG1-209ENST00000596104 IRF2BP2Q7Z5L9 587 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 NLRP8Q86W28 1048 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 NRSN1Q8IZ57 195 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 UNC5BQ8IZJ1 945 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 OR10G6Q8NH81 332 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 FNIP1Q8TF40 1166 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 PIH1D2Q8WWB5 315 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 SCAMP4Q969E2 229 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 ABHD17AQ96GS6 310 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 COX14Q96I36 57 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 PCMTD1Q96MG8 357 aaPredicted RBP9.91□□□□□ -0.82
LIG1-209ENST00000596104 SMIM14Q96QK8 99 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 ERGIC2Q96RQ1 377 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 SLC38A3Q99624 504 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 CTRCQ99895 268 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 ABCG8Q9H221 673 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 APMAPQ9HDC9 416 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 FBXO8Q9NRD0 319 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 ETNK2Q9NVF9 386 aa9.91□□□□□ -0.82
LIG1-209ENST00000596104 LIMA1Q9UHB6 759 aaKnown RBP9.91□□□□□ -0.82
LIG1-209ENST00000596104 MAN2B2Q9Y2E5 1009 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms