RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	SEPT10	Q9P0V9	454 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	KALRN	O60229	2985 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760		A0A0U1RQJ8	604 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	CYSRT1	A8MQ03	144 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	TNFRSF10C	O14798	259 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	GP1BA	P07359	652 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	KEL	P23276	732 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	PTPN3	P26045	913 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	COPS2	P61201	443 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	CDK3	Q00526	305 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	INSM1	Q01101	510 aa	Predicted RBP	13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	PTS	Q03393	145 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	DPT	Q07507	201 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	WASHC5	Q12768	1159 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	SLC14A2	Q15849	920 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	CDKN3	Q16667	212 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	QPCT	Q16769	361 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	TBC1D25	Q3MII6	688 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	TEX44	Q53QW1	395 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	BBS12	Q6ZW61	710 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	BZW1	Q7L1Q6	419 aa	Known RBP	13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	KIAA1328	Q86T90	577 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	CCDC50	Q8IVM0	306 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	SLC35F3	Q8IY50	421 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	TFB1M	Q8WVM0	346 aa	Known RBP	13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	P3H4	Q92791	437 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	HAUS1	Q96CS2	278 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	TEKT5	Q96M29	485 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	HERPUD2	Q9BSE4	406 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	DESI2	Q9BSY9	194 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	TEX101	Q9BY14	249 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	SLC25A51	Q9H1U9	297 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	MRPL40	Q9NQ50	206 aa	Known RBP	13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	NCKIPSD	Q9NZQ3	722 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	TRIM10	Q9UDY6	481 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	DNPEP	Q9ULA0	475 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	PCDHA3	Q9Y5H8	950 aa		13.28	□□□□□ -0.28
SREBF1-223	ENST00000584760	ZNF462	Q96JM2	2506 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	PRSS38	A1L453	326 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	CCDC66	A2RUB6	948 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	ANKRD66	B4E2M5	251 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	YY2	O15391	372 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	MT-CO3	P00414	261 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	ANXA6	P08133	673 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	CTNNA2	P26232	953 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	CD68	P34810	354 aa	Predicted RBP	13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	PTPN7	P35236	360 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	DUSP3	P51452	185 aa	Predicted RBP	13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	E2F1	Q01094	437 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	GALNT3	Q14435	633 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	ELOC	Q15369	112 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	TCEA2	Q15560	299 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	RAET1G	Q6H3X3	334 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	GUSBP11	Q6P575	273 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	LVRN	Q6Q4G3	990 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	ZNF765	Q7L2R6	523 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	RD3	Q7Z3Z2	195 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	NT5DC3	Q86UY8	548 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	ZC3H18	Q86VM9	953 aa	Known RBP	13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	RAVER1	Q8IY67	606 aa	Known RBP	13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	SDR16C5	Q8N3Y7	309 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	DCBLD1	Q8N8Z6	715 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	IFI44	Q8TCB0	444 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	KIAA1524	Q8TCG1	905 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	ALG3	Q92685	438 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	ADGRE3	Q9BY15	652 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	ABCG8	Q9H221	673 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	GLOD4	Q9HC38	313 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	EVA1B	Q9NVM1	165 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	CD84	Q9UIB8	345 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	EFR3B	Q9Y2G0	817 aa		13.27	□□□□□ -0.29
SREBF1-223	ENST00000584760	C1orf232	A0A0U1RR37	186 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	EME2	A4GXA9	379 aa	Predicted RBP	13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	GOLGA6C	A6NDK9	693 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	GOLGA6B	A6NDN3	693 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	APOC4-APOC2	K7ER74	178 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	ERVH48-1	M5A8F1	160 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	PDE2A	O00408	941 aa	Predicted RBP	13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	MTSS1	O43312	755 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	OPA1	O60313	960 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	CLDN7	O95471	211 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	MT-CYB	P00156	380 aa	Predicted RBP	13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	TNF	P01375	233 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	APOC2	P02655	101 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	GOLGA6D	P0CG33	693 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	CTSE	P14091	401 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	NAP1L1	P55209	391 aa	Known RBP	13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	NOMO1	Q15155	1222 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	NR0B2	Q15466	257 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	ARHGAP40	Q5TG30	622 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	CDCP2	Q5VXM1	449 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	ADAMTSL4	Q6UY14	1074 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	CACTIN-AS1	Q8N1I8	211 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	ARL10	Q8N8L6	244 aa		13.26	□□□□□ -0.29
SREBF1-223	ENST00000584760	KY	Q8NBH2	561 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms