RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 FAF2Q96CS3 445 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 AP2M1Q96CW1 435 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 LYSMD1Q96S90 227 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 CCNL2Q96S94 520 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 CPNE5Q9HCH3 593 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 SPATS2LQ9NUQ6 558 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 ZNHIT6Q9NWK9 470 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 IFNKQ9P0W0 207 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 TAAR2Q9P1P5 351 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 CTTNBP2NLQ9P2B4 639 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 SUFUQ9UMX1 484 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 AHCTF1Q8WYP5 2266 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 MGAQ8IWI9 3026 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 SSU72P8A0A1W2PR75 194 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 B4DGG1 531 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 CBFA2T2O43439 604 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 B4GAT1O43505 415 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 FUCA1P04066 466 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 PDHA1P08559 390 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 CD48P09326 243 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 SLC5A2P31639 672 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 CASP14P31944 242 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 ADCY8P40145 1251 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 ARHGAP25P42331 645 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 GNPDA1P46926 289 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 CFHR1Q03591 330 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 MMRN1Q13201 1228 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 CLN3Q13286 438 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 TRA2AQ13595 282 aaKnown RBP eCLIP12.14□□□□□ -0.475e-8■■□□□ 11.4
GTF3C1-204ENST00000564664 TCEA2Q15560 299 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 TAF1BQ53T94 588 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 TMEM164Q5U3C3 297 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 LRRC66Q68CR7 880 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 NYAP1Q6ZVC0 841 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 TSPAN33Q86UF1 283 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 SLITRK4Q8IW52 837 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 CCL4L1Q8NHW4 92 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 ZNF830Q96NB3 372 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 FOXP3Q9BZS1 431 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 CDH19Q9H159 772 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 ABCG8Q9H221 673 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 SEPT10Q9P0V9 454 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 ATXN7L1Q9ULK2 861 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 LOXL2Q9Y4K0 774 aa12.14□□□□□ -0.47
GTF3C1-204ENST00000564664 GOLGA6CA6NDK9 693 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 GOLGA6BA6NDN3 693 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 HGSO14964 777 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 MFSD11O43934 449 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 ECEL1O95672 775 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 TPM1P09493 284 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 TMEM253P0C7T8 217 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 GOLGA6DP0CG33 693 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 CTPS1P17812 591 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 STC1P52823 247 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 CTBSQ01459 385 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 BIRC2Q13490 618 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 ASTE1Q2TB18 679 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 SKOR2Q2VWA4 1001 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 ATP13A4Q4VNC1 1196 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 JAMLQ86YT9 394 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 CCDC13Q8IYE1 715 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 ARRDC2Q8TBH0 407 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 CCHCR1Q8TD31 782 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 HDAC11Q96DB2 347 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 COX14Q96I36 57 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 RNF157Q96PX1 679 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 DNAJC7Q99615 494 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 ANP32EQ9BTT0 268 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 TDRD1Q9BXT4 1180 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 ADGRE3Q9BY15 652 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 BRD8Q9H0E9 1235 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 DEF6Q9H4E7 631 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 RMI1Q9H9A7 625 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 PCDH9Q9HC56 1237 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 GOLGA6AQ9NYA3 693 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 KALRNO60229 2985 aa12.13□□□□□ -0.47
GTF3C1-204ENST00000564664 ANKRD66B4E2M5 251 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 CASC3O15234 703 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 SOD1P00441 154 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 PRLP01236 227 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 LIPCP11150 499 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 ZFXP17010 805 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 KDELR1P24390 212 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 GPLD1P80108 840 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 MAP9Q49MG5 647 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 PYCR3Q53H96 274 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 LRRC38Q5VT99 294 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 PCSK4Q6UW60 755 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 GALNT13Q8IUC8 556 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 ZNF843Q8N446 348 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 PQLC3Q8N755 202 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 CCNYQ8ND76 341 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 TTC9Q92623 222 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 OR2M4Q96R27 311 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 SRPK1Q96SB4 655 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 MLPHQ9BV36 600 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 MAK16Q9BXY0 300 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 XPO4Q9C0E2 1151 aaKnown RBP12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 VPS18Q9P253 973 aa12.12□□□□□ -0.47
GTF3C1-204ENST00000564664 PISDQ9UG56 409 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms