RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 CD96P40200 585 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 CD86P42081 329 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 IL12RB1P42701 662 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 FNTBP49356 437 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 SERPINH1P50454 418 aaKnown RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 SCNN1BP51168 640 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 METAP1P53582 386 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 PLTPP55058 493 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 SEMG2Q02383 582 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 TRAF2Q12933 501 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 HNRNPDQ14103 355 aaKnown RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 ZNF235Q14590 738 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 KCNJ11Q14654 390 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 PLCL1Q15111 1095 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 DLG2Q15700 870 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 ACCSLQ4AC99 568 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 AASDHQ4L235 1098 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 FNBP1LQ5T0N5 605 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 RNASEH2BQ5TBB1 312 aaKnown RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 STPG1Q5TH74 334 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 TIGD7Q6NT04 549 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 HIBCHQ6NVY1 386 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 C22orf39Q6P5X5 142 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 PKN3Q6P5Z2 889 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 KDELC1Q6UW63 502 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 UNQ6494/PRO21346Q6UXR6 183 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 CCNI2Q6ZMN8 369 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 ZNF783Q6ZMS7 281 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 ZNF534Q76KX8 674 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 CEP68Q76N32 757 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 MAATS1Q7Z4T9 603 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 AHI1Q8N157 1196 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 RYBPQ8N488 228 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 SPEM1Q8N4L4 309 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 SH2D3CQ8N5H7 860 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 KIAA1958Q8N8K9 716 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 NAT8LQ8N9F0 302 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 TERB1Q8NA31 727 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 ATP11CQ8NB49 1132 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 IPMKQ8NFU5 416 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 FBXO25Q8TCJ0 367 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 FAM3CQ92520 227 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 PRCCQ92733 491 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 ART4Q93070 314 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 TTC17Q96AE7 1141 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 SNF8Q96H20 258 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 LOXL4Q96JB6 756 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 RUNDC3BQ96NL0 473 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 FCRL5Q96RD9 977 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 SEMA3CQ99985 751 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 P2RY13Q9BPV8 354 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 WDR83Q9BRX9 315 aaKnown RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 FICDQ9BVA6 458 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 SLC2A11Q9BYW1 496 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 GBA3Q9H227 469 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 RETREG1Q9H6L5 497 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 NOD2Q9HC29 1040 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 TRPV5Q9NQA5 729 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 ZDHHC18Q9NUE0 388 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 ELOVL2Q9NXB9 296 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 PAK5Q9P286 719 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 EVLQ9UI08 416 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 ANAPC5Q9UJX4 755 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 ADAMTS6Q9UKP5 1117 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 TPX2Q9ULW0 747 aaKnown RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 NDRG2Q9UN36 371 aaKnown RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 UTP11Q9Y3A2 253 aaKnown RBP5.35□□□□□ -1.55
ATXN3-244ENST00000556898 ATRXP46100 2492 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 CACNA1IQ9P0X4 2223 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 DOCK4Q8N1I0 1966 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 TICRRQ7Z2Z1 1910 aa5.35□□□□□ -1.55
ATXN3-244ENST00000556898 PLK4O00444 970 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 NEBLO76041 1014 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 STK10O94804 968 aaKnown RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SEC31AO94979 1220 aaKnown RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 PAPSS2O95340 614 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 APODP05090 189 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 CTSLP07711 333 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 RNASE1P07998 156 aaKnown RBP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 PDHA1P08559 390 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 C1QTNF9P0C862 333 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 CD8BP10966 210 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 CHRNB1P11230 501 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 HNRNPLP14866 589 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 PRKCHP24723 683 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 HOXA6P31267 233 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 LMAN1P49257 510 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 RENBPP51606 427 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 RHOAP61586 193 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 ECT2LQ008S8 904 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SATB1Q01826 763 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 ZNF33AQ06730 810 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 CDK5R2Q13319 367 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SEMA5AQ13591 1074 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 SLC12A1Q13621 1099 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 LRRC32Q14392 662 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 GALNT3Q14435 633 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 HLTFQ14527 1009 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATXN3-244ENST00000556898 DMC1Q14565 340 aa5.34□□□□□ -1.55
ATXN3-244ENST00000556898 ZNF234Q14588 700 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms