RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 THEGLP0DJG4 465 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 SEMG2Q02383 582 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 DHX9Q08211 1270 aaKnown RBP11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 PDIA2Q13087 525 aaKnown RBP11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 PTK2BQ14289 1009 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 SMAD1Q15797 465 aaKnown RBP11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 HIF1AQ16665 826 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 SIRPB2Q5JXA9 342 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 CERCAMQ5T4B2 595 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 ARMC12Q5T9G4 340 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 DENND5AQ6IQ26 1287 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 KYAT3Q6YP21 454 aaKnown RBP11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 PCGF5Q86SE9 256 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 IGDCC3Q8IVU1 814 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 MCUQ8NE86 351 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 LPCAT1Q8NF37 534 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 CENPTQ96BT3 561 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 ZBTB9Q96C00 473 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 SCRN2Q96FV2 425 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 BMFQ96LC9 184 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 TDRD1Q9BXT4 1180 aaKnown RBP11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 SAYSD1Q9NPB0 183 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 CASS4Q9NQ75 786 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 SYBUQ9NX95 663 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 AAR2Q9Y312 384 aaKnown RBP11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 SLCO1B1Q9Y6L6 691 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 GPR179Q6PRD1 2367 aa11.72□□□□□ -0.53
TUBA1C-203ENST00000548470 ABCA7Q8IZY2 2146 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 LRRK1Q38SD2 2015 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 GOLGA6CA6NDK9 693 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 GOLGA6BA6NDN3 693 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 H0Y8X5 98 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 SPINT1O43278 529 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 LZTS3O60299 673 aaPredicted RBP11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 MMP20O60882 483 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 PGLSO95336 258 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 TRIM16O95361 564 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 GOLGA6DP0CG33 693 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 CYP2A6P11509 494 aaPredicted RBP11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 CTPS1P17812 591 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 MMP12P39900 470 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 GRK6P43250 576 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 MAGEA3P43357 314 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 TNNT3P45378 269 aaPredicted RBP11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 LIG3P49916 1009 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 NOVA1P51513 510 aaKnown RBP11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 ARL4CP56559 192 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 FAM193AP78312 1265 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 CAV1Q03135 178 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 CDK18Q07002 472 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 FGL2Q14314 439 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 LRRC14Q15048 493 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 SLC14A2Q15849 920 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 CCDC38Q502W7 563 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 CAPN12Q6ZSI9 719 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 Q6ZSR6 202 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 USP45Q70EL2 814 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 DPPA4Q7L190 304 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 GLRX5Q86SX6 157 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 NAXDQ8IW45 347 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 KLK6Q92876 244 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 C9orf72Q96LT7 481 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 SRPK1Q96SB4 655 aaKnown RBP11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 KLF6Q99612 283 aaPredicted RBP11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 ADGRE3Q9BY15 652 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 IL21RQ9HBE5 538 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 GOLGA6AQ9NYA3 693 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 MTRF1LQ9UGC7 380 aaKnown RBP11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 CHMP2BQ9UQN3 213 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 SPO11Q9Y5K1 396 aa11.71□□□□□ -0.53
TUBA1C-203ENST00000548470 TNRC6BQ9UPQ9 1833 aaKnown RBP11.71□□□□□ -0.54
TUBA1C-203ENST00000548470 SPTY2D1-AS1A0A0U1RR47 76 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 LOC285095A0A1B0GVY8 99 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 ERI2A8K979 691 aaKnown RBP11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 PSMD11O00231 422 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 PSMD3O43242 534 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 SH3BP5O60239 455 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 FZD6O60353 706 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 NDST3O95803 873 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 CPP00450 1065 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 SLC4A1P02730 911 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 HOXC4P09017 264 aaPredicted RBP11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 ALPIP09923 528 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 H2AFXP16104 143 aaPredicted RBP11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 VIPR1P32241 457 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 ELK3P41970 407 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 PFN3P60673 137 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 HNRNPKP61978 463 aaKnown RBP eCLIP11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 CDK16Q00536 496 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 SEPT6Q14141 434 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 POU6F1Q14863 301 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 TRIP6Q15654 476 aaKnown RBP11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 SLC1A5Q15758 541 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 QPCTQ16769 361 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 PSAPL1Q6NUJ1 521 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 LRRC8BQ6P9F7 803 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 CES3Q6UWW8 571 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 RANBP10Q6VN20 620 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 LIPIQ6XZB0 460 aa11.7□□□□□ -0.54
TUBA1C-203ENST00000548470 GCNT7Q6ZNI0 430 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms