RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 EGFP01133 1207 aa30.35■■■□□ 2.45
CCM2-219ENST00000544363 GLULP15104 373 aa30.35■■■□□ 2.45
CCM2-219ENST00000544363 DRD1P21728 446 aa30.35■■■□□ 2.45
CCM2-219ENST00000544363 CACNG1Q06432 222 aa30.35■■■□□ 2.45
CCM2-219ENST00000544363 PDE1CQ14123 709 aaPredicted RBP30.35■■■□□ 2.45
CCM2-219ENST00000544363 USP10Q14694 798 aaKnown RBP30.35■■■□□ 2.45
CCM2-219ENST00000544363 DPPA4Q7L190 304 aa30.35■■■□□ 2.45
CCM2-219ENST00000544363 MMAAQ8IVH4 418 aaKnown RBP30.35■■■□□ 2.45
CCM2-219ENST00000544363 KCNV2Q8TDN2 545 aa30.35■■■□□ 2.45
CCM2-219ENST00000544363 TCP10LQ8TDR4 215 aa30.35■■■□□ 2.45
CCM2-219ENST00000544363 C1QTNF3-AMACRE9PGA6 284 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 TM9SF1O15321 606 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 MPOP05164 745 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 C1SP09871 688 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 SPAM1P38567 509 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 CDKN1CP49918 316 aaPredicted RBP30.34■■■□□ 2.45
CCM2-219ENST00000544363 METAP1P53582 386 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 GRSF1Q12849 480 aaKnown RBP eCLIP30.34■■■□□ 2.45
CCM2-219ENST00000544363 CAMK2GQ13555 558 aaPredicted RBP30.34■■■□□ 2.45
CCM2-219ENST00000544363 PUS10Q3MIT2 529 aaKnown RBP30.34■■■□□ 2.45
CCM2-219ENST00000544363 PSAPL1Q6NUJ1 521 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 ERAP2Q6P179 960 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 PIANPQ8IYJ0 282 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 GPATCH11Q8N954 259 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 ATXN2LQ8WWM7 1075 aaKnown RBP30.34■■■□□ 2.45
CCM2-219ENST00000544363 ELMO2Q96JJ3 720 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 CABS1Q96KC9 395 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 FAM96AQ9H5X1 160 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 IL26Q9NPH9 171 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 FAM50BQ9Y247 325 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 MYO10Q9HD67 2058 aa30.34■■■□□ 2.45
CCM2-219ENST00000544363 GAPDHSO14556 408 aaPredicted RBP30.33■■■□□ 2.45
CCM2-219ENST00000544363 SRP72O76094 671 aaKnown RBP30.33■■■□□ 2.45
CCM2-219ENST00000544363 CRHR1P34998 444 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 CCT5P48643 541 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 CSRP3P50461 194 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 GNGT1P63211 74 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 POU4F1Q01851 419 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 LRRC14Q15048 493 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 AARS2Q5JTZ9 985 aaKnown RBP30.33■■■□□ 2.45
CCM2-219ENST00000544363 FAM151BQ6UXP7 276 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 SLC41A1Q8IVJ1 513 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 MLXIPLQ9NP71 852 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 CORO1CQ9ULV4 474 aaPredicted RBP30.33■■■□□ 2.45
CCM2-219ENST00000544363 SHOX2O60902 331 aaPredicted RBP30.33■■■□□ 2.45
CCM2-219ENST00000544363 TTPAP49638 278 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 PPM1JQ5JR12 505 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 IER5LQ5T953 404 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 ZDHHC20Q5W0Z9 365 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 GPR26Q8NDV2 337 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 IQCGQ9H095 443 aaKnown RBP30.33■■■□□ 2.45
CCM2-219ENST00000544363 DYRK4Q9NR20 520 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 SLC2A4RGQ9NR83 387 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 CRYL1Q9Y2S2 319 aa30.33■■■□□ 2.45
CCM2-219ENST00000544363 ZNF106Q9H2Y7 1883 aaKnown RBP30.32■■■□□ 2.44
CCM2-219ENST00000544363 GLYATL1P3A0A0U1RQE8 302 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 PFDN6O15212 129 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 NDUFS3O75489 264 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 PRAMEF1O95521 474 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 SRFP11831 508 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 SAT1P21673 171 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 NTSR1P30989 418 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 MMP12P39900 470 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 SPINT3P49223 89 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 WDR4P57081 412 aaKnown RBP30.32■■■□□ 2.44
CCM2-219ENST00000544363 RALGDSQ12967 914 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 TDGQ13569 410 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 C2orf27AQ580R0 203 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 RBM20Q5T481 1227 aaKnown RBP30.32■■■□□ 2.44
CCM2-219ENST00000544363 FAM46CQ5VWP2 391 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 FBXL19Q6PCT2 694 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 CDHR3Q6ZTQ4 885 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 TBRG4Q969Z0 631 aaKnown RBP eCLIP30.32■■■□□ 2.442e-6■■■■■ 54.9
CCM2-219ENST00000544363 MSANTD3Q96H12 275 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 OMDQ99983 421 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 VPS11Q9H270 941 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 PSD3Q9NYI0 1048 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 PKD2L2Q9NZM6 624 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 VPS9D1Q9Y2B5 631 aa30.32■■■□□ 2.44
CCM2-219ENST00000544363 A0A096LPK6 155 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 SYNCRIPO60506 623 aaKnown RBP30.31■■■□□ 2.44
CCM2-219ENST00000544363 C2P06681 752 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 IL9P15248 144 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 PSMD8P48556 350 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 SUOXP51687 545 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 SEPT7Q16181 437 aaKnown RBP30.31■■■□□ 2.44
CCM2-219ENST00000544363 RNF187Q5TA31 235 aaPredicted RBP30.31■■■□□ 2.44
CCM2-219ENST00000544363 SDE2Q6IQ49 451 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 TAS2R42Q7RTR8 314 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 SNX20Q7Z614 316 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 ERLEC1Q96DZ1 483 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 NDNQ99608 321 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 RSPH9Q9H1X1 276 aaPredicted RBP30.31■■■□□ 2.44
CCM2-219ENST00000544363 SLC17A7Q9P2U7 560 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 PLLPQ9Y342 182 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 F5P12259 2224 aa30.31■■■□□ 2.44
CCM2-219ENST00000544363 CKAP5Q14008 2032 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 ASMTLO95671 621 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 STMN1P16949 149 aa30.3■■■□□ 2.44
CCM2-219ENST00000544363 ITGALP20701 1170 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms