RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 SFRP1Q8N474 314 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 FITM2Q8N6M3 262 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PI4KAP1Q8N8J0 262 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PTGR2Q8N8N7 351 aaPredicted RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 IQUBQ8NA54 791 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 FAM46DQ8NEK8 389 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 OR52K1Q8NGK4 314 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 ZFP28Q8NHY6 868 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CASP10Q92851 521 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 SMARCE1Q969G3 411 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 KLHL29Q96CT2 875 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 PRR11Q96HE9 360 aaPredicted RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 SMOQ99835 787 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CCDC106Q9BWC9 280 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 STRA6Q9BX79 667 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CARD11Q9BXL7 1154 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 WDR11Q9BZH6 1224 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 IMPG2Q9BZV3 1241 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 TRIM31Q9BZY9 425 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 OR10A2Q9H208 303 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 SLC6A15Q9H2J7 730 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 SERHL2Q9H4I8 314 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 DENND2DQ9H6A0 471 aaPredicted RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 GPR35Q9HC97 309 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 MAGEE1Q9HCI5 957 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF304Q9HCX3 659 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 GLRX2Q9NS18 164 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 ALKBH4Q9NXW9 302 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 WSB2Q9NYS7 404 aaPredicted RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 ARMCX3Q9UH62 379 aaPredicted RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 INTS6Q9UL03 887 aaKnown RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 OAZ3Q9UMX2 235 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 CDYLQ9Y232 598 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 OSGIN2Q9Y236 505 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 DRG1Q9Y295 367 aaKnown RBP3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 KCNK7Q9Y2U2 307 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 ASB3Q9Y575 518 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 SLC30A1Q9Y6M5 507 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 TAF1LQ8IZX4 1826 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 UBR3Q6ZT12 1888 aa3.88□□□□□ -1.79
AC055720.1-201ENST00000539552 FBN2P35556 2912 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 A0A1W2PQF6 199 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 LRRIQ4A6NIV6 560 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 SLC38A8A6NNN8 435 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 BTBD18B2RXH4 712 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 B5MCH6 92 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 TEX22C9J3V5 150 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 CXCL11O14625 94 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 IFIT3O14879 490 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 SYN3O14994 580 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 POLR3GO15318 223 aaPredicted RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 CYP27B1O15528 508 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 RRP9O43818 475 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 DIAPH2O60879 1101 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 SPAG6O75602 509 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 KLHL18O94889 574 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 EPN2O95208 641 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 CER1O95813 267 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 PAHP00439 452 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 ASGR1P07306 291 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 ATXN1LP0C7T5 689 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 TSPY4P0CV99 314 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 TSPY10P0CW01 314 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 NEFHP12036 1026 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 ZFXP17010 805 aaPredicted RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 AGAP20933 346 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 TCEA1P23193 301 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 PAX7P23759 505 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 LRPAP1P30533 357 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 RFC4P35249 363 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 CASRP41180 1078 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 DIO1P49895 249 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 MTHFSP49914 203 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 ETV1P50549 477 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 MFAP4P55083 255 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 SNU13P55769 128 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 CLRN1P58418 232 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 CRHR2Q13324 411 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 THOC5Q13769 683 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF273Q14593 569 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 IL11RAQ14626 422 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 PCOLCEQ15113 449 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF750Q32MQ0 723 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 SLC9B1Q4ZJI4 515 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 TEX35Q5T0J7 233 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 MANEALQ5VSG8 457 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 GKAP1Q5VSY0 366 aaPredicted RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 LAIR1Q6GTX8 287 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 RBM43Q6ZSC3 357 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 ADCK2Q7Z695 626 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 TLK2Q86UE8 772 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 SGMS1Q86VZ5 419 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 CMTM4Q8IZR5 234 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 FSTL5Q8N475 847 aaPredicted RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 KDM1BQ8NB78 822 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 RBM15BQ8NDT2 890 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 TBC1D15Q8TC07 691 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 URGCPQ8TCY9 931 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 BCAS4Q8TDM0 211 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 TEKT1Q969V4 418 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms