RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 POMCP01189 267 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 ALDOCP09972 364 aaKnown RBP8.3□□□□□ -1.08
CHD7-202ENST00000524602 IDO1P14902 403 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 ZNF37AP17032 561 aaPredicted RBP8.3□□□□□ -1.08
CHD7-202ENST00000524602 CDH2P19022 906 aaPredicted RBP8.3□□□□□ -1.08
CHD7-202ENST00000524602 SH3BP2P78314 561 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 DSC2Q02487 901 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 KCTD21Q4G0X4 260 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 NHSL2Q5HYW2 709 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 MS4A13Q5J8X5 152 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 GDF6Q6KF10 455 aaPredicted RBP8.3□□□□□ -1.08
CHD7-202ENST00000524602 HMBOX1Q6NT76 420 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 TRIML2Q8N7C3 387 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 TNIP2Q8NFZ5 429 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 ARRDC2Q8TBH0 407 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 LZICQ8WZA0 190 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 PPWD1Q96BP3 646 aaKnown RBP8.3□□□□□ -1.08
CHD7-202ENST00000524602 PTERQ96BW5 349 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 TRIM54Q9BYV2 358 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 CLK4Q9HAZ1 481 aaKnown RBP8.3□□□□□ -1.08
CHD7-202ENST00000524602 SYTL2Q9HCH5 934 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 SDR39U1Q9NRG7 319 aaPredicted RBP8.3□□□□□ -1.08
CHD7-202ENST00000524602 OLA1Q9NTK5 396 aaKnown RBP8.3□□□□□ -1.08
CHD7-202ENST00000524602 ACTR3BQ9P1U1 418 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 UXTQ9UBK9 157 aaPredicted RBP8.3□□□□□ -1.08
CHD7-202ENST00000524602 RSL24D1Q9UHA3 163 aaKnown RBP8.3□□□□□ -1.08
CHD7-202ENST00000524602 PHF24Q9UPV7 400 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 TLL2Q9Y6L7 1015 aa8.3□□□□□ -1.08
CHD7-202ENST00000524602 TYW5A2RUC4 315 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 J3KR12 359 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 CD3EAPO15446 510 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 TRPA1O75762 1119 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 CDK14O94921 469 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 LBPP18428 481 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 IL10P22301 178 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 PSMA4P25789 261 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 CDK9P50750 372 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 ARSDP51689 593 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 YBEYP58557 167 aaPredicted RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 TYSND1Q2T9J0 566 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 OGFOD2Q6N063 350 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 SPATA19Q7Z5L4 167 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 AMIGO2Q86SJ2 522 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 PTGR2Q8N8N7 351 aaPredicted RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 BRSK1Q8TDC3 778 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 TWIST2Q8WVJ9 160 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 TFAP2CQ92754 450 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 PABPC5Q96DU9 382 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 POLR1EQ9GZS1 481 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 RETREG1Q9H6L5 497 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 NOL11Q9H8H0 719 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 PFDN4Q9NQP4 134 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.29□□□□□ -1.085e-10■■■■□ 25.3
CHD7-202ENST00000524602 GBF1Q92538 1859 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 KANSL1LA0AUZ9 987 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 TRIM64CA6NLI5 447 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 DRGXA6NNA5 263 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 ZNF701M0R085 212 aaPredicted RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 AKAP10O43572 662 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 KERAO60938 352 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 TRMUO75648 421 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 CSPG5O95196 566 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 GPIP06744 558 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 CTSHP09668 335 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 HDCP19113 662 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 GRIA3P42263 894 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 KCNC1P48547 511 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 MAPKAPK2P49137 400 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 PGFP49763 221 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 PRKCQQ04759 706 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 NFE2Q16621 373 aaPredicted RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 PAN2Q504Q3 1202 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 GNASQ5JWF2 1037 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 CYP2R1Q6VVX0 501 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 RPS27LQ71UM5 84 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 PHYKPLQ8IUZ5 450 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 ERI1Q8IV48 349 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 OR9I1Q8NGQ6 314 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 TRIB2Q92519 343 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 C3orf30Q96M34 536 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 ZNF599Q96NL3 588 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 BIRC8Q96P09 236 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 CIB1Q99828 191 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 C9orf16Q9BUW7 83 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 NUSAP1Q9BXS6 441 aaKnown RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 DERL2Q9GZP9 239 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 MID1IP1Q9NPA3 183 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 OLAHQ9NV23 265 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 MARCH4Q9P2E8 410 aaPredicted RBP8.29□□□□□ -1.08
CHD7-202ENST00000524602 PADI3Q9ULW8 664 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 GABRQQ9UN88 632 aa8.29□□□□□ -1.08
CHD7-202ENST00000524602 DHRS12A0PJE2 317 aa8.28□□□□□ -1.08
CHD7-202ENST00000524602 NR5A2O00482 541 aa8.28□□□□□ -1.08
CHD7-202ENST00000524602 RAMP2O60895 175 aa8.28□□□□□ -1.08
CHD7-202ENST00000524602 OAZ2O95190 189 aa8.28□□□□□ -1.08
CHD7-202ENST00000524602 GOT2P00505 430 aaKnown RBP8.28□□□□□ -1.08
CHD7-202ENST00000524602 HAPLN1P10915 354 aaPredicted RBP8.28□□□□□ -1.08
CHD7-202ENST00000524602 MAGEA11P43364 429 aa8.28□□□□□ -1.08
CHD7-202ENST00000524602 NME5P56597 212 aa8.28□□□□□ -1.08
CHD7-202ENST00000524602 MAXP61244 160 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms