RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 GRIA2P42262 883 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 IL12RB1P42701 662 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 SERPINB4P48594 390 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 CSRP3P50461 194 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 METAP1P53582 386 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 POLR2LP62875 67 aaKnown RBP15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 POU4F1Q01851 419 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 SF3A3Q12874 501 aaKnown RBP eCLIP15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 SKIV2LQ15477 1246 aaKnown RBP15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 PDK4Q16654 411 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 TAF1BQ53T94 588 aaPredicted RBP15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 C9orf64Q5T6V5 341 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 ZNF549Q6P9A3 640 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 BRAT1Q6PJG6 821 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 TAS2R42Q7RTR8 314 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 CSGALNACT1Q8TDX6 532 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 OSBPL1AQ9BXW6 950 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 TMEM245Q9H330 911 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 CACNA2D2Q9NY47 1150 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 SARDHQ9UL12 918 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 SLC30A1Q9Y6M5 507 aa15.41■□□□□ 0.06
CTNNA1-236ENST00000522792 TRIOBPQ9H2D6 2365 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 KPNA3O00505 521 aaPredicted RBP15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 NDUFS3O75489 264 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 CHRM1P11229 460 aaPredicted RBP15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 NEFHP12036 1026 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 TIMP2P16035 220 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 CDKN2DP55273 166 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 ZNF805Q5CZA5 627 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 RFLNAQ6ZTI6 216 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 CPLX4Q7Z7G2 160 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 CLEC14AQ86T13 490 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 SPATA6LQ8N4H0 392 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 LRRC8CQ8TDW0 803 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 ZNF473Q8WTR7 871 aaKnown RBP15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 KCTD4Q8WVF5 259 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 PPM1EQ8WY54 764 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 PBXIP1Q96AQ6 731 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 UNKQ9C0B0 810 aaKnown RBP15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 MTF2Q9Y483 593 aaPredicted RBP15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 SCN8AQ9UQD0 1980 aa15.4■□□□□ 0.06
CTNNA1-236ENST00000522792 UPK3BL1B0FP48 263 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 UPK3BL2E5RIL1 263 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 GAPDHSO14556 408 aaPredicted RBP15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 SRP72O76094 671 aaKnown RBP15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 PRAMEF1O95521 474 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 FAM107AO95990 144 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 C1SP09871 688 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 XPAP23025 273 aaPredicted RBP15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 FMO4P31512 558 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 CA5AP35218 305 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 WASP42768 502 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 POLD2P49005 469 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 GALK1P51570 392 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 PTSQ03393 145 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 KYAT3Q6YP21 454 aaKnown RBP15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 FAM47EQ6ZV65 393 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 TTC7BQ86TV6 843 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 PIM3Q86V86 326 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 KDM1BQ8NB78 822 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 OR8D1Q8WZ84 308 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 FAM136AQ96C01 138 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 PCDH12Q9NPG4 1184 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 IL26Q9NPH9 171 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 FGFR1OP2Q9NVK5 253 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 INTS10Q9NVR2 710 aaKnown RBP15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 THAP10Q9P2Z0 257 aaPredicted RBP15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 ACOT9Q9Y305 439 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 VWA7Q9Y334 891 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 TCF20Q9UGU0 1960 aaKnown RBP15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 TSPAN11A1L157 253 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 ERICH4A6NGS2 130 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 C16orf96A6NNT2 1141 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 OR1I1O60431 355 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 PLIN3O60664 434 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 PROCP04070 461 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 EPHX1P07099 455 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 BGNP21810 368 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 CRABP2P29373 138 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 SPAM1P38567 509 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 SEC13P55735 322 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 CACNG1Q06432 222 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 INSCQ1MX18 579 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 ZNF771Q7L3S4 317 aaPredicted RBP15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 PARS2Q7L3T8 475 aaKnown RBP15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 GPR26Q8NDV2 337 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 LPGAT1Q92604 370 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 ZNF75CPQ92670 426 aaPredicted RBP15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 LRIG1Q96JA1 1093 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 C1QTNF1Q9BXJ1 281 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 ANKRD6Q9Y2G4 727 aa15.39■□□□□ 0.05
CTNNA1-236ENST00000522792 GLYATL1P3A0A0U1RQE8 302 aa15.38■□□□□ 0.05
CTNNA1-236ENST00000522792 PRNPP04156 253 aa15.38■□□□□ 0.05
CTNNA1-236ENST00000522792 VIPR1P32241 457 aa15.38■□□□□ 0.05
CTNNA1-236ENST00000522792 GLRBP48167 497 aa15.38■□□□□ 0.05
CTNNA1-236ENST00000522792 MLLT1Q03111 559 aaPredicted RBP15.38■□□□□ 0.05
CTNNA1-236ENST00000522792 ARHGEF7Q14155 803 aa15.38■□□□□ 0.05
CTNNA1-236ENST00000522792 FAM45BPQ6NSW5 357 aa15.38■□□□□ 0.05
CTNNA1-236ENST00000522792 CENPLQ8N0S6 344 aaPredicted RBP15.38■□□□□ 0.05
CTNNA1-236ENST00000522792 PIP4K2CQ8TBX8 421 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms