RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 NFIL3Q16649 462 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 CT47A1Q5JQC4 288 aaPredicted RBP11.62□□□□□ -0.55
TRIM56-204ENST00000487252 TMEM110Q86TL2 294 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 CUZD1Q86UP6 607 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 PELI3Q8N2H9 469 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 CBARPQ8N350 705 aaPredicted RBP11.62□□□□□ -0.55
TRIM56-204ENST00000487252 SFRP1Q8N474 314 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 RYBPQ8N488 228 aaPredicted RBP11.62□□□□□ -0.55
TRIM56-204ENST00000487252 ZNF808Q8N4W9 903 aaPredicted RBP11.62□□□□□ -0.55
TRIM56-204ENST00000487252 STK32AQ8WU08 396 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 NCSTNQ92542 709 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 NAP1L5Q96NT1 182 aaPredicted RBP11.62□□□□□ -0.55
TRIM56-204ENST00000487252 SLC38A3Q99624 504 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 SIK2Q9H0K1 926 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 HSD3B7Q9H2F3 369 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 CXXC4Q9H2H0 198 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 PCDH12Q9NPG4 1184 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 MPP6Q9NZW5 540 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 IMPACTQ9P2X3 320 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 LNPEPQ9UIQ6 1025 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 TRAF3IP3Q9Y228 551 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 RPH3AQ9Y2J0 694 aaPredicted RBP11.62□□□□□ -0.55
TRIM56-204ENST00000487252 COQ4Q9Y3A0 265 aa11.62□□□□□ -0.55
TRIM56-204ENST00000487252 RNF225M0QZC1 329 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-204ENST00000487252 PDE2AO00408 941 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-204ENST00000487252 BIN1O00499 593 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 RHOBTB3O94955 611 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 F9P00740 461 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 C9P02748 559 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 MYCLP1P12525 358 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-204ENST00000487252 GM2AP17900 193 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 MMP12P39900 470 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 EPHA4P54764 986 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 YWHAEP62258 255 aaKnown RBP11.61□□□□□ -0.55
TRIM56-204ENST00000487252 TPM4P67936 248 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 SH3BP2P78314 561 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 GNA12Q03113 381 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 POLD3Q15054 466 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-204ENST00000487252 UGP2Q16851 508 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 MED25Q71SY5 747 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 RASGRP3Q8IV61 690 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 TMEM102Q8N9M5 508 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-204ENST00000487252 ACBD4Q8NC06 268 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 SLC37A2Q8TED4 501 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 PTCD2Q8WV60 388 aaKnown RBP11.61□□□□□ -0.55
TRIM56-204ENST00000487252 C1orf74Q96LT6 269 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 OR6C1Q96RD1 312 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 MED15Q96RN5 788 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 FRMD8Q9BZ67 464 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-204ENST00000487252 ZMYND15Q9H091 742 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 ILKAPQ9H0C8 392 aaPredicted RBP11.61□□□□□ -0.55
TRIM56-204ENST00000487252 WDR26Q9H7D7 661 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 ARHGEF38Q9NXL2 777 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 SERTAD1Q9UHV2 236 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 MOSPD1Q9UJG1 213 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 MAN1B1Q9UKM7 699 aa11.61□□□□□ -0.55
TRIM56-204ENST00000487252 SYNJ2BP-COX16A0A087WUM0 186 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 A6NL46 340 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 TOX3O15405 576 aaPredicted RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 POLR2DO15514 142 aaKnown RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 BUB1BO60566 1050 aaPredicted RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 RECQL5O94762 991 aaPredicted RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 TIAF1O95411 115 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 C8BP07358 591 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 PLEKP08567 350 aaPredicted RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 KLK2P20151 261 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 BRD2P25440 801 aaKnown RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 ADCY8P40145 1251 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 MXI1P50539 228 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 MYL5Q02045 173 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 DCAF10Q5QP82 559 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 ATXN7L2Q5T6C5 722 aaPredicted RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 PNCKQ6P2M8 343 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 FAM199XQ6PEV8 388 aaPredicted RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 CXXC5Q7LFL8 322 aaKnown RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 MRGPRGQ86SM5 289 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 PRIMA1Q86XR5 153 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 PARP9Q8IXQ6 854 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 DRC7Q8IY82 874 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 DEFB106AQ8N104 65 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 MLKLQ8NB16 471 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 SCARF2Q96GP6 870 aaPredicted RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 C9orf72Q96LT7 481 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 SLX1AQ9BQ83 275 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 TTYH3Q9C0H2 523 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 BLZF1Q9H2G9 400 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 EPB41L1Q9H4G0 881 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 SARS2Q9NP81 518 aaKnown RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 ST7Q9NRC1 585 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 KCND1Q9NSA2 647 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 COX16Q9P0S2 106 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 KLHL3Q9UH77 587 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 SUFUQ9UMX1 484 aa11.6□□□□□ -0.55
TRIM56-204ENST00000487252 FARSAQ9Y285 508 aaKnown RBP11.6□□□□□ -0.55
TRIM56-204ENST00000487252 PIKFYVEQ9Y2I7 2098 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 KIAA1324LA8MWY0 1029 aaPredicted RBP11.59□□□□□ -0.55
TRIM56-204ENST00000487252 RASA4BC9J798 803 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 E5RJQ4 531 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 RASA4O43374 803 aa11.59□□□□□ -0.55
TRIM56-204ENST00000487252 KLRC4O43908 158 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms