RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PRDM16Q9HAZ2 1276 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 SATB2Q9UPW6 733 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 CNTNAP1P78357 1384 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 FGF10O15520 208 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-201ENST00000361866 KRT6AP02538 564 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 KRT6BP04259 564 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 ZNF182P17025 639 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-201ENST00000361866 KRT6CP48668 564 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 GLUD2P49448 558 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 BOP1Q14137 746 aaKnown RBP13.88□□□□□ -0.19
COL6A1-201ENST00000361866 TSNQ15631 228 aaKnown RBP13.88□□□□□ -0.19
COL6A1-201ENST00000361866 RABL3Q5HYI8 236 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 LINGO1Q96FE5 620 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 EPS8L2Q9H6S3 715 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 AKTIPQ9H8T0 292 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 EIF2B3Q9NR50 452 aaKnown RBP13.88□□□□□ -0.19
COL6A1-201ENST00000361866 MOSPD1Q9UJG1 213 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 NPEPPSL1A6NEC2 478 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 FAM72CH0Y354 149 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 VPS4BO75351 444 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 ECT2LQ008S8 904 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 PRKCQQ04759 706 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 SPDYE7PQ495Y7 208 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 FAM72AQ5TYM5 149 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 FAM72DQ6L9T8 149 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 FAM72BQ86X60 149 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 OR4K2Q8NGD2 314 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 SCAMP5Q8TAC9 235 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 TMEM74Q96NL1 305 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 TSSK3Q96PN8 268 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 APOL4Q9BPW4 351 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 ADGRE3Q9BY15 652 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 EXD2Q9NVH0 621 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 CACNA2D2Q9NY47 1150 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 OPTCQ9UBM4 332 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 NRP1O14786 923 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 TP73O15350 636 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 RSL1D1O76021 490 aaKnown RBP13.87□□□□□ -0.19
COL6A1-201ENST00000361866 MED26O95402 600 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 PRKCGP05129 697 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 THRBP10828 461 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 ITGALP20701 1170 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 AQP1P29972 269 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 DAOAP59103 153 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 CLCQ05315 142 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 SPANXN2Q5MJ10 180 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 THAP5Q7Z6K1 395 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 CIR1Q86X95 450 aaPredicted RBP13.87□□□□□ -0.19
COL6A1-201ENST00000361866 TXNDC5Q8NBS9 432 aaKnown RBP13.87□□□□□ -0.19
COL6A1-201ENST00000361866 SELENOMQ8WWX9 145 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 GPR21Q99679 349 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 UBAP1Q9NZ09 502 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 ULK1O75385 1050 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 FADS2O95864 444 aaKnown RBP13.87□□□□□ -0.19
COL6A1-201ENST00000361866 POLR2JP52435 117 aaKnown RBP13.87□□□□□ -0.19
COL6A1-201ENST00000361866 SYTL3Q4VX76 610 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 MFSD14CQ5VZR4 134 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 RNF19BQ6ZMZ0 732 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 CHSY3Q70JA7 882 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 SETD9Q8NE22 299 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 MTERF3Q96E29 417 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 FEM1AQ9BSK4 669 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 TSEN34Q9BSV6 310 aaKnown RBP13.87□□□□□ -0.19
COL6A1-201ENST00000361866 CXCL11O14625 94 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 HSPA14Q0VDF9 509 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 TJAP1Q5JTD0 557 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 CYP2S1Q96SQ9 504 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 SLC39A8Q9C0K1 460 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 EURLQ9NYK6 297 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 SLC27A5Q9Y2P5 690 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 ASB3Q9Y575 518 aa13.87□□□□□ -0.19
COL6A1-201ENST00000361866 TAF4O00268 1085 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 DPYSL4O14531 572 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 HTRA2O43464 458 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 DARSP14868 501 aaKnown RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 RPL10P27635 214 aaKnown RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 PSEN2P49810 448 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 NFE2Q16621 373 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 CXCL17Q6UXB2 119 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 ADGRG6Q86SQ4 1221 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 KBTBD6Q86V97 674 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 OR10Q1Q8NGQ4 319 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 KCNA7Q96RP8 456 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 NUAK2Q9H093 628 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 CCDC88AQ3V6T2 1871 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 MGAT4DA6NG13 374 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 OR4F21O95013 312 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 STAU1O95793 577 aaKnown RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 CNPP09543 421 aaKnown RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 VEPH1Q14D04 833 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 SH3D19Q5HYK7 790 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 ADCK2Q7Z695 626 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 C11orf96Q7Z7L8 435 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 TMEM86AQ8N2M4 240 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 OR10A6Q8NH74 314 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 RPL10LQ96L21 214 aaKnown RBP13.86□□□□□ -0.19
COL6A1-201ENST00000361866 CDK15Q96Q40 435 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 OR52E6Q96RD3 313 aa13.86□□□□□ -0.19
COL6A1-201ENST00000361866 GPR22Q99680 433 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms