RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 GOLGA6DP0CG33 693 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 ZNF30P17039 623 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 SKOR1P84550 965 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 PTSQ03393 145 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 TFDP3Q5H9I0 405 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 FAM182AQ5T1J6 154 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 GUSBP11Q6P575 273 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 HEATR4Q86WZ0 1026 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 GKN2Q86XP6 184 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 SLC35F3Q8IY50 421 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 CACTIN-AS1Q8N1I8 211 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 AGAP3Q96P47 875 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 RBM15Q96T37 977 aaKnown RBP eCLIP19.48■□□□□ 0.71
SREBF1-220ENST00000581707 TEX101Q9BY14 249 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 ABCG4Q9H172 646 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 MRPL40Q9NQ50 206 aaKnown RBP19.48■□□□□ 0.71
SREBF1-220ENST00000581707 GOLGA6AQ9NYA3 693 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 REXO2Q9Y3B8 237 aaKnown RBP19.48■□□□□ 0.71
SREBF1-220ENST00000581707 DUSP10Q9Y6W6 482 aa19.48■□□□□ 0.71
SREBF1-220ENST00000581707 EME2A4GXA9 379 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-220ENST00000581707 SRRM3A6NNA2 597 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-220ENST00000581707 TAF4O00268 1085 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 MT-CO3P00414 261 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 MYCLP1P12525 358 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-220ENST00000581707 TGM2P21980 687 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 MARCKSL1P49006 195 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 NAP1L1P55209 391 aaKnown RBP19.47■□□□□ 0.71
SREBF1-220ENST00000581707 DPTQ07507 201 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 CYP4F3Q08477 520 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 RAET1GQ6H3X3 334 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 RFLNAQ6ZTI6 216 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 EFL1Q7Z2Z2 1120 aaKnown RBP19.47■□□□□ 0.71
SREBF1-220ENST00000581707 NT5DC3Q86UY8 548 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 PROSER1Q86XN7 944 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 CCDC50Q8IVM0 306 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 DCBLD1Q8N8Z6 715 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 EXD1Q8NHP7 514 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 TFB1MQ8WVM0 346 aaKnown RBP19.47■□□□□ 0.71
SREBF1-220ENST00000581707 KRT35Q92764 455 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 IMP4Q96G21 291 aaKnown RBP19.47■□□□□ 0.71
SREBF1-220ENST00000581707 RBM41Q96IZ5 413 aaKnown RBP19.47■□□□□ 0.71
SREBF1-220ENST00000581707 BAG1Q99933 345 aaPredicted RBP19.47■□□□□ 0.71
SREBF1-220ENST00000581707 ADGRE3Q9BY15 652 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 ABCG8Q9H221 673 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 CYP4F12Q9HCS2 524 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 GULP1Q9UBP9 304 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 MOSPD1Q9UJG1 213 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 RP1P56715 2156 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 APC2O95996 2303 aa19.47■□□□□ 0.71
SREBF1-220ENST00000581707 hCG_1818297A0A087WSY0 165 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 BTNL10A8MVZ5 291 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 ANKRD66B4E2M5 251 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 PECAM1P16284 738 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-220ENST00000581707 TEAD1P28347 426 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 STC1P52823 247 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 CDK3Q00526 305 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 ADCY2Q08462 1091 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 PRKD1Q15139 912 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-220ENST00000581707 QPCTQ16769 361 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 TEX44Q53QW1 395 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 ACRBPQ8NEB7 543 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 MAPK15Q8TD08 544 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 P3H4Q92791 437 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 AP2M1Q96CW1 435 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 LYSMD1Q96S90 227 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 MLPHQ9BV36 600 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-220ENST00000581707 LACRTQ9GZZ8 138 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 SLC25A51Q9H1U9 297 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 IMPACTQ9P2X3 320 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 DKK4Q9UBT3 224 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 CD84Q9UIB8 345 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 PADI4Q9UM07 663 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 GPR34Q9UPC5 381 aa19.46■□□□□ 0.71
SREBF1-220ENST00000581707 PRSS38A1L453 326 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 CLDN7O95471 211 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 CDC25BP30305 580 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 GPR1P46091 355 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 CDCP2Q5VXM1 449 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 ZNF765Q7L2R6 523 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 TAF8Q7Z7C8 310 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 NLRP8Q86W28 1048 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 NRSN1Q8IZ57 195 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 NAT6Q93015 286 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 SCAMP4Q969E2 229 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 TMEM168Q9H0V1 697 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 GLOD4Q9HC38 313 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 SIRPGQ9P1W8 387 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 PCDHA3Q9Y5H8 950 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 PKD1L2Q7Z442 2459 aa19.45■□□□□ 0.7
SREBF1-220ENST00000581707 DSPP15924 2871 aaKnown RBP19.44■□□□□ 0.7
SREBF1-220ENST00000581707 C1orf232A0A0U1RR37 186 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 CEACAM5P06731 702 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 PTPN3P26045 913 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 CTNNA1P35221 906 aaKnown RBP19.44■□□□□ 0.7
SREBF1-220ENST00000581707 VAV2P52735 878 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 GALNT3Q14435 633 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 PPP2R5EQ16537 467 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 ADAMTSL4Q6UY14 1074 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 KDELC2Q7Z4H8 507 aa19.44■□□□□ 0.7
SREBF1-220ENST00000581707 KIAA1328Q86T90 577 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms