RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 MX2P20592 715 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 CDK3Q00526 305 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 DPTQ07507 201 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 CYP4F3Q08477 520 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 ITKQ08881 620 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 AP1B1Q10567 949 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 PTK2BQ14289 1009 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 NOMO1Q15155 1222 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 C6orf132Q5T0Z8 1188 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 KAZNQ674X7 775 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 ZCCHC8Q6NZY4 707 aaKnown RBP10.64□□□□□ -0.71
CD44-227ENST00000528086 RD3Q7Z3Z2 195 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 TRIM74Q86UV6 250 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 HEATR4Q86WZ0 1026 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 TMTC1Q8IUR5 882 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 CACTIN-AS1Q8N1I8 211 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 GALNT15Q8N3T1 639 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 IFI44Q8TCB0 444 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 NUS1Q96E22 293 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 SCARF2Q96GP6 870 aaPredicted RBP10.64□□□□□ -0.71
CD44-227ENST00000528086 AGAP3Q96P47 875 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 DESI2Q9BSY9 194 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 PCDH9Q9HC56 1237 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 DDX56Q9NY93 547 aaKnown RBP10.64□□□□□ -0.71
CD44-227ENST00000528086 SPASTQ9UBP0 616 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 DKK4Q9UBT3 224 aa10.64□□□□□ -0.71
CD44-227ENST00000528086 OAS3Q9Y6K5 1087 aaKnown RBP10.64□□□□□ -0.71
CD44-227ENST00000528086 A0A1W2PQ67 120 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 TMEM8BA6NDV4 472 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 NEMP2A6NFY4 417 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 FADS2P1A8MWK0 482 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 ANKRD66B4E2M5 251 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 H3BM21 787 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 TNFRSF10CO14798 259 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 AURKAO14965 403 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 TLX3O43711 291 aaPredicted RBP10.63□□□□□ -0.71
CD44-227ENST00000528086 RASGRP1O95267 797 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 MT-CO3P00414 261 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 PIRTP0C851 137 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 MYCLP1P12525 358 aaPredicted RBP10.63□□□□□ -0.71
CD44-227ENST00000528086 TEAD1P28347 426 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 CA5AP35218 305 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 CTNNA1P35221 906 aaKnown RBP10.63□□□□□ -0.71
CD44-227ENST00000528086 GALNT3Q14435 633 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 PDK1Q15118 436 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 TEX44Q53QW1 395 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 TFDP3Q5H9I0 405 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 ZFYVE27Q5T4F4 411 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 OGFOD3Q6PK18 319 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 KDELC1Q6UW63 502 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 EFL1Q7Z2Z2 1120 aaKnown RBP10.63□□□□□ -0.71
CD44-227ENST00000528086 NT5DC3Q86UY8 548 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 C17orf82Q86X59 251 aaPredicted RBP10.63□□□□□ -0.71
CD44-227ENST00000528086 BBS5Q8N3I7 341 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 LPCAT1Q8NF37 534 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 GPR156Q8NFN8 814 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 OR56A4Q8NGH8 313 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 EXD1Q8NHP7 514 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 NSMCE1Q8WV22 266 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 BTN2A2Q8WVV5 523 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 HAUS1Q96CS2 278 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 OXNAD1Q96HP4 312 aaPredicted RBP10.63□□□□□ -0.71
CD44-227ENST00000528086 COX14Q96I36 57 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 TEKT5Q96M29 485 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 DUSP23Q9BVJ7 150 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 HEMGNQ9BXL5 484 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 SLC13A1Q9BZW2 595 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 SLC25A51Q9H1U9 297 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 WDR26Q9H7D7 661 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 GLOD4Q9HC38 313 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 SPATS2LQ9NUQ6 558 aaKnown RBP10.63□□□□□ -0.71
CD44-227ENST00000528086 KLQ9UEF7 1012 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 TMPRSS11EQ9UL52 423 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 RAXQ9Y2V3 346 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 TTLL3Q9Y4R7 772 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 PCDHA3Q9Y5H8 950 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 SPO11Q9Y5K1 396 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 PTPRQQ9UMZ3 2332 aa10.63□□□□□ -0.71
CD44-227ENST00000528086 MGAQ8IWI9 3026 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 A0A1W2PQM1 296 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 PRSS38A1L453 326 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 CPED1A4D0V7 1026 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 NTN3O00634 580 aaPredicted RBP10.62□□□□□ -0.71
CD44-227ENST00000528086 GP1BAP07359 652 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 CYP2A6P11509 494 aaPredicted RBP10.62□□□□□ -0.71
CD44-227ENST00000528086 JUPP14923 745 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 CES1P23141 567 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 CTNNA2P26232 953 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 AK4P27144 223 aaPredicted RBP10.62□□□□□ -0.71
CD44-227ENST00000528086 CDC25BP30305 580 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 CYLC1P35663 651 aaPredicted RBP10.62□□□□□ -0.71
CD44-227ENST00000528086 SPINT3P49223 89 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 VAV2P52735 878 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 RPL26P61254 145 aaKnown RBP10.62□□□□□ -0.71
CD44-227ENST00000528086 DAB2P98082 770 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 RTP5Q14D33 572 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 SPA17Q15506 151 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 PPP2R5EQ16537 467 aa10.62□□□□□ -0.71
CD44-227ENST00000528086 HENMT1Q5T8I9 393 aaKnown RBP10.62□□□□□ -0.71
CD44-227ENST00000528086 ADAMTSL4Q6UY14 1074 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms