RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 DPPA4Q7L190 304 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 TIPARPQ7Z3E1 657 aaKnown RBP9.39□□□□□ -0.91
NEDD9-211ENST00000508546 FAM129CQ86XR2 697 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 CAMK1DQ8IU85 385 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 UMODL1-AS1Q8N2C9 162 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 PELI3Q8N2H9 469 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 CCDC185Q8N715 623 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 PATE1Q8WXA2 126 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 RXFP2Q8WXD0 754 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 CPA5Q8WXQ8 436 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 STARD8Q92502 1023 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 POM121Q96HA1 1249 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 TEX101Q9BY14 249 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 FRMD8Q9BZ67 464 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-211ENST00000508546 ATP13A3Q9H7F0 1226 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 PDFQ9HBH1 243 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 FBXO8Q9NRD0 319 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 PHPT1Q9NRX4 125 aaPredicted RBP9.39□□□□□ -0.91
NEDD9-211ENST00000508546 KCTD5Q9NXV2 234 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 KCTD3Q9Y597 815 aa9.39□□□□□ -0.91
NEDD9-211ENST00000508546 BIN1O00499 593 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 TEX33O43247 280 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 CEACAM5P06731 702 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 TCN2P20062 427 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 AK4P27144 223 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-211ENST00000508546 ERCC5P28715 1186 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-211ENST00000508546 FASLGP48023 281 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 POLR2LP62875 67 aaKnown RBP9.38□□□□□ -0.91
NEDD9-211ENST00000508546 MAP7Q14244 749 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 TAF3Q5VWG9 929 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 NAA35Q5VZE5 725 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 SLC30A9Q6PML9 568 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 ARHGAP22Q7Z5H3 698 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 SLFN11Q7Z7L1 901 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 SRLQ86TD4 932 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 CREBRFQ8IUR6 639 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 NRSN1Q8IZ57 195 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 TEX19Q8NA77 164 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 GPT2Q8TD30 523 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 SPOCK2Q92563 424 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 COQ10AQ96MF6 247 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 LRRC19Q9H756 370 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 CATSPERBQ9H7T0 1116 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 TMEM9Q9P0T7 183 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 RWDD2AQ9UIY3 292 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 SUFUQ9UMX1 484 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 ST14Q9Y5Y6 855 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 KCNMB2Q9Y691 235 aa9.38□□□□□ -0.91
NEDD9-211ENST00000508546 CCDC168Q8NDH2 2452 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 MKRN2OSH3BPM6 223 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 TRAFD1O14545 582 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-211ENST00000508546 PRAMEF11O60813 436 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 STK17BO94768 372 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 IVLP07476 585 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 MMEP08473 750 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 MMP8P22894 467 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 MPSTP25325 297 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 TEAD1P28347 426 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 ADCY8P40145 1251 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 STAT5AP42229 794 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 RGRP47804 291 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 COPB1P53618 953 aaKnown RBP9.37□□□□□ -0.91
NEDD9-211ENST00000508546 CDK3Q00526 305 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 CTBSQ01459 385 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 BCL2L1Q07817 233 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 NSUN2Q08J23 767 aaKnown RBP eCLIP9.37□□□□□ -0.91
NEDD9-211ENST00000508546 ACOX1Q15067 660 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 NFKBIBQ15653 356 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 WDR74Q6RFH5 385 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-211ENST00000508546 NOP9Q86U38 636 aaKnown RBP9.37□□□□□ -0.91
NEDD9-211ENST00000508546 HEATR4Q86WZ0 1026 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 ZNF677Q86XU0 584 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 CCDC13Q8IYE1 715 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 UNC5BQ8IZJ1 945 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 PYROXD2Q8N2H3 581 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 TSEN2Q8NCE0 465 aaKnown RBP9.37□□□□□ -0.91
NEDD9-211ENST00000508546 GALNT11Q8NCW6 608 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 JOSD2Q8TAC2 188 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 EPS8L1Q8TE68 723 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 FAM172AQ8WUF8 416 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 NUS1Q96E22 293 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 SCARF2Q96GP6 870 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-211ENST00000508546 PRDM8Q9NQV8 689 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 CUEDC1Q9NWM3 386 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-211ENST00000508546 DONSONQ9NYP3 566 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 SLC17A4Q9Y2C5 497 aa9.37□□□□□ -0.91
NEDD9-211ENST00000508546 FAM170AA1A519 330 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 J3KR12 359 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 K7EM74 188 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 FGF10O15520 208 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-211ENST00000508546 VPS4BO75351 444 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 DLGAP3O95886 979 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 CYP1A1P04798 512 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-211ENST00000508546 PRKCSHP14314 528 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-211ENST00000508546 NR1D1P20393 614 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 HTR7P34969 479 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 ACTR1BP42025 376 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 MTIF2P46199 727 aaKnown RBP9.36□□□□□ -0.91
NEDD9-211ENST00000508546 GNPDA1P46926 289 aa9.36□□□□□ -0.91
NEDD9-211ENST00000508546 NDST2P52849 883 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms