RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 TAZQ16635 292 aa15.07■□□□□ 0
USP39-217ENST00000491659 TFDP3Q5H9I0 405 aa15.07■□□□□ 0
USP39-217ENST00000491659 KAZNQ674X7 775 aa15.07■□□□□ 0
USP39-217ENST00000491659 CRTC1Q6UUV9 634 aa15.07■□□□□ 0
USP39-217ENST00000491659 NYAP1Q6ZVC0 841 aa15.07■□□□□ 0
USP39-217ENST00000491659 SLC35F3Q8IY50 421 aa15.07■□□□□ 0
USP39-217ENST00000491659 RCOR2Q8IZ40 523 aa15.07■□□□□ 0
USP39-217ENST00000491659 PELI3Q8N2H9 469 aa15.07■□□□□ 0
USP39-217ENST00000491659 ARL10Q8N8L6 244 aa15.07■□□□□ 0
USP39-217ENST00000491659 DCBLD1Q8N8Z6 715 aa15.07■□□□□ 0
USP39-217ENST00000491659 AP2M1Q96CW1 435 aa15.07■□□□□ 0
USP39-217ENST00000491659 AGAP3Q96P47 875 aa15.07■□□□□ 0
USP39-217ENST00000491659 LGR4Q9BXB1 951 aa15.07■□□□□ 0
USP39-217ENST00000491659 TEX101Q9BY14 249 aa15.07■□□□□ 0
USP39-217ENST00000491659 ADGRE3Q9BY15 652 aa15.07■□□□□ 0
USP39-217ENST00000491659 CYP4F12Q9HCS2 524 aa15.07■□□□□ 0
USP39-217ENST00000491659 MRPL40Q9NQ50 206 aaKnown RBP15.07■□□□□ 0
USP39-217ENST00000491659 SIRPGQ9P1W8 387 aa15.07■□□□□ 0
USP39-217ENST00000491659 CD84Q9UIB8 345 aa15.07■□□□□ 0
USP39-217ENST00000491659 PRSS38A1L453 326 aa15.06■□□□□ 0
USP39-217ENST00000491659 ZRANB2O95218 330 aaKnown RBP eCLIP15.06■□□□□ 0
USP39-217ENST00000491659 MMP2P08253 660 aa15.06■□□□□ 0
USP39-217ENST00000491659 MARCKSL1P49006 195 aa15.06■□□□□ 0
USP39-217ENST00000491659 STC1P52823 247 aa15.06■□□□□ 0
USP39-217ENST00000491659 SKOR1P84550 965 aa15.06■□□□□ 0
USP39-217ENST00000491659 DPTQ07507 201 aa15.06■□□□□ 0
USP39-217ENST00000491659 CYP4F3Q08477 520 aa15.06■□□□□ 0
USP39-217ENST00000491659 ZNF765Q7L2R6 523 aa15.06■□□□□ 0
USP39-217ENST00000491659 TECPR1Q7Z6L1 1165 aa15.06■□□□□ 0
USP39-217ENST00000491659 TAF8Q7Z7C8 310 aa15.06■□□□□ 0
USP39-217ENST00000491659 NT5DC3Q86UY8 548 aa15.06■□□□□ 0
USP39-217ENST00000491659 CBARPQ8N350 705 aaPredicted RBP15.06■□□□□ 0
USP39-217ENST00000491659 CNTD1Q8N815 330 aa15.06■□□□□ 0
USP39-217ENST00000491659 KYQ8NBH2 561 aa15.06■□□□□ 0
USP39-217ENST00000491659 EXD1Q8NHP7 514 aa15.06■□□□□ 0
USP39-217ENST00000491659 TFB1MQ8WVM0 346 aaKnown RBP15.06■□□□□ 0
USP39-217ENST00000491659 P3H4Q92791 437 aa15.06■□□□□ 0
USP39-217ENST00000491659 SMIM14Q96QK8 99 aa15.06■□□□□ 0
USP39-217ENST00000491659 LYSMD1Q96S90 227 aa15.06■□□□□ 0
USP39-217ENST00000491659 GULP1Q9UBP9 304 aa15.06■□□□□ 0
USP39-217ENST00000491659 PADI4Q9UM07 663 aa15.06■□□□□ 0
USP39-217ENST00000491659 GPR34Q9UPC5 381 aa15.06■□□□□ 0
USP39-217ENST00000491659 COL27A1Q8IZC6 1860 aaPredicted RBP15.06■□□□□ 0
USP39-217ENST00000491659 ASPMQ8IZT6 3477 aa15.05■□□□□ -0
USP39-217ENST00000491659 hCG_1818297A0A087WSY0 165 aa15.05■□□□□ -0
USP39-217ENST00000491659 A0A0U1RQS6 177 aa15.05■□□□□ -0
USP39-217ENST00000491659 C1orf232A0A0U1RR37 186 aa15.05■□□□□ -0
USP39-217ENST00000491659 PRLP01236 227 aa15.05■□□□□ -0
USP39-217ENST00000491659 PECAM1P16284 738 aaPredicted RBP15.05■□□□□ -0
USP39-217ENST00000491659 VAV2P52735 878 aa15.05■□□□□ -0
USP39-217ENST00000491659 PTSQ03393 145 aa15.05■□□□□ -0
USP39-217ENST00000491659 GALNT3Q14435 633 aa15.05■□□□□ -0
USP39-217ENST00000491659 PRKD1Q15139 912 aaPredicted RBP15.05■□□□□ -0
USP39-217ENST00000491659 LLGL1Q15334 1064 aa15.05■□□□□ -0
USP39-217ENST00000491659 SLC14A2Q15849 920 aa15.05■□□□□ -0
USP39-217ENST00000491659 PPP2R5EQ16537 467 aa15.05■□□□□ -0
USP39-217ENST00000491659 QPCTQ16769 361 aa15.05■□□□□ -0
USP39-217ENST00000491659 CDCP2Q5VXM1 449 aa15.05■□□□□ -0
USP39-217ENST00000491659 KCTD16Q68DU8 428 aa15.05■□□□□ -0
USP39-217ENST00000491659 RAD9BQ6WBX8 426 aa15.05■□□□□ -0
USP39-217ENST00000491659 KIAA1328Q86T90 577 aa15.05■□□□□ -0
USP39-217ENST00000491659 RAVER1Q8IY67 606 aaKnown RBP15.05■□□□□ -0
USP39-217ENST00000491659 NRSN1Q8IZ57 195 aa15.05■□□□□ -0
USP39-217ENST00000491659 TXLNBQ8N3L3 684 aa15.05■□□□□ -0
USP39-217ENST00000491659 WDR48Q8TAF3 677 aa15.05■□□□□ -0
USP39-217ENST00000491659 IMP4Q96G21 291 aaKnown RBP15.05■□□□□ -0
USP39-217ENST00000491659 BAG1Q99933 345 aaPredicted RBP15.05■□□□□ -0
USP39-217ENST00000491659 MLPHQ9BV36 600 aaPredicted RBP15.05■□□□□ -0
USP39-217ENST00000491659 NRSN2Q9GZP1 204 aa15.05■□□□□ -0
USP39-217ENST00000491659 TMEM168Q9H0V1 697 aa15.05■□□□□ -0
USP39-217ENST00000491659 SLC25A51Q9H1U9 297 aa15.05■□□□□ -0
USP39-217ENST00000491659 ABCG8Q9H221 673 aa15.05■□□□□ -0
USP39-217ENST00000491659 SUDS3Q9H7L9 328 aaPredicted RBP15.05■□□□□ -0
USP39-217ENST00000491659 CARS2Q9HA77 564 aaKnown RBP15.05■□□□□ -0
USP39-217ENST00000491659 PKD2L2Q9NZM6 624 aa15.05■□□□□ -0
USP39-217ENST00000491659 AK5Q9Y6K8 562 aa15.05■□□□□ -0
USP39-217ENST00000491659 RCCD1A6NED2 376 aa15.04■□□□□ -0
USP39-217ENST00000491659 BTNL10A8MVZ5 291 aa15.04■□□□□ -0
USP39-217ENST00000491659 GOLGA6L6A8MZA4 724 aa15.04■□□□□ -0
USP39-217ENST00000491659 ANKRD66B4E2M5 251 aa15.04■□□□□ -0
USP39-217ENST00000491659 TAF4O00268 1085 aa15.04■□□□□ -0
USP39-217ENST00000491659 MTSS1O43312 755 aa15.04■□□□□ -0
USP39-217ENST00000491659 CSO75390 466 aaKnown RBP15.04■□□□□ -0
USP39-217ENST00000491659 CLDN7O95471 211 aa15.04■□□□□ -0
USP39-217ENST00000491659 PTPN3P26045 913 aa15.04■□□□□ -0
USP39-217ENST00000491659 CDC25BP30305 580 aa15.04■□□□□ -0
USP39-217ENST00000491659 CTNNA1P35221 906 aaKnown RBP15.04■□□□□ -0
USP39-217ENST00000491659 GNPDA1P46926 289 aa15.04■□□□□ -0
USP39-217ENST00000491659 PCSK7Q16549 785 aa15.04■□□□□ -0
USP39-217ENST00000491659 TEX44Q53QW1 395 aa15.04■□□□□ -0
USP39-217ENST00000491659 PERM1Q5SV97 790 aa15.04■□□□□ -0
USP39-217ENST00000491659 DOK6Q6PKX4 331 aa15.04■□□□□ -0
USP39-217ENST00000491659 ADAMTSL4Q6UY14 1074 aa15.04■□□□□ -0
USP39-217ENST00000491659 B4GALNT4Q76KP1 1039 aa15.04■□□□□ -0
USP39-217ENST00000491659 ACRBPQ8NEB7 543 aa15.04■□□□□ -0
USP39-217ENST00000491659 FAM46DQ8NEK8 389 aa15.04■□□□□ -0
USP39-217ENST00000491659 OR6C4Q8NGE1 309 aa15.04■□□□□ -0
USP39-217ENST00000491659 CCHCR1Q8TD31 782 aa15.04■□□□□ -0
USP39-217ENST00000491659 KRT35Q92764 455 aa15.04■□□□□ -0
USP39-217ENST00000491659 SCAMP4Q969E2 229 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms