RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 GOLGA4Q13439 2230 aaKnown RBP20.41■□□□□ 0.86
HDAC4-209ENST00000487617 CAPN8A6NHC0 703 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 MT-CO3P00414 261 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 MYCLP1P12525 358 aaPredicted RBP20.41■□□□□ 0.86
HDAC4-209ENST00000487617 PTSQ03393 145 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 CYP4F3Q08477 520 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 TFDP3Q5H9I0 405 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 LVRNQ6Q4G3 990 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 RFLNAQ6ZTI6 216 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 PROSER1Q86XN7 944 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 SLC35F3Q8IY50 421 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 SDR16C5Q8N3Y7 309 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 MAPK15Q8TD08 544 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 RBM41Q96IZ5 413 aaKnown RBP20.41■□□□□ 0.86
HDAC4-209ENST00000487617 RBM15Q96T37 977 aaKnown RBP eCLIP20.41■□□□□ 0.86
HDAC4-209ENST00000487617 BAG1Q99933 345 aaPredicted RBP20.41■□□□□ 0.86
HDAC4-209ENST00000487617 TEX101Q9BY14 249 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 CYP4F12Q9HCS2 524 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 SIRPGQ9P1W8 387 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 GULP1Q9UBP9 304 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 REXO2Q9Y3B8 237 aaKnown RBP20.41■□□□□ 0.86
HDAC4-209ENST00000487617 USP24Q9UPU5 2620 aa20.41■□□□□ 0.86
HDAC4-209ENST00000487617 hCG_1818297A0A087WSY0 165 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 EME2A4GXA9 379 aaPredicted RBP20.4■□□□□ 0.86
HDAC4-209ENST00000487617 SRRM3A6NNA2 597 aaPredicted RBP20.4■□□□□ 0.86
HDAC4-209ENST00000487617 TAF4O00268 1085 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 PECAM1P16284 738 aaPredicted RBP20.4■□□□□ 0.86
HDAC4-209ENST00000487617 TGM2P21980 687 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 STC1P52823 247 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 CDK3Q00526 305 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 NT5DC3Q86UY8 548 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 CACTIN-AS1Q8N1I8 211 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 DCBLD1Q8N8Z6 715 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 ACRBPQ8NEB7 543 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 EXD1Q8NHP7 514 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 TFB1MQ8WVM0 346 aaKnown RBP20.4■□□□□ 0.86
HDAC4-209ENST00000487617 KRT35Q92764 455 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 AP2M1Q96CW1 435 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 CALR3Q96L12 384 aaKnown RBP20.4■□□□□ 0.86
HDAC4-209ENST00000487617 ADGRE3Q9BY15 652 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 ABCG8Q9H221 673 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 PADI4Q9UM07 663 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 GPR34Q9UPC5 381 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 DUSP10Q9Y6W6 482 aa20.4■□□□□ 0.86
HDAC4-209ENST00000487617 PRSS38A1L453 326 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 CLDN7O95471 211 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 TEAD1P28347 426 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 GPR1P46091 355 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 DPTQ07507 201 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 ADCY2Q08462 1091 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 PRKD1Q15139 912 aaPredicted RBP20.39■□□□□ 0.85
HDAC4-209ENST00000487617 QPCTQ16769 361 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 TAF8Q7Z7C8 310 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 ARL10Q8N8L6 244 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 SPC24Q8NBT2 197 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 P3H4Q92791 437 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 NAT6Q93015 286 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 IMP4Q96G21 291 aaKnown RBP20.39■□□□□ 0.85
HDAC4-209ENST00000487617 MLPHQ9BV36 600 aaPredicted RBP20.39■□□□□ 0.85
HDAC4-209ENST00000487617 TMEM168Q9H0V1 697 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 SLC25A51Q9H1U9 297 aa20.39■□□□□ 0.85
HDAC4-209ENST00000487617 SUDS3Q9H7L9 328 aaPredicted RBP20.39■□□□□ 0.85
HDAC4-209ENST00000487617 C1orf232A0A0U1RR37 186 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 BTNL10A8MVZ5 291 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 ANKRD66B4E2M5 251 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 PTPN3P26045 913 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 CDC25BP30305 580 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 VAV2P52735 878 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 GALNT3Q14435 633 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 TEX44Q53QW1 395 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 PERM1Q5SV97 790 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 CDCP2Q5VXM1 449 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 ZNF765Q7L2R6 523 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 KDELC2Q7Z4H8 507 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 KIAA1328Q86T90 577 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 KYQ8NBH2 561 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 SCAMP4Q969E2 229 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 HAUS1Q96CS2 278 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 NXPE2Q96DL1 559 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 LYSMD1Q96S90 227 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 HEMGNQ9BXL5 484 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 LACRTQ9GZZ8 138 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 CARS2Q9HA77 564 aaKnown RBP20.38■□□□□ 0.85
HDAC4-209ENST00000487617 GLOD4Q9HC38 313 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 IMPACTQ9P2X3 320 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 DKK4Q9UBT3 224 aa20.38■□□□□ 0.85
HDAC4-209ENST00000487617 KNTC1P50748 2209 aa20.37■□□□□ 0.85
HDAC4-209ENST00000487617 CEACAM5P06731 702 aa20.37■□□□□ 0.85
HDAC4-209ENST00000487617 CTNNA1P35221 906 aaKnown RBP20.37■□□□□ 0.85
HDAC4-209ENST00000487617 PPP2R5EQ16537 467 aa20.37■□□□□ 0.85
HDAC4-209ENST00000487617 PCSK7Q16549 785 aa20.37■□□□□ 0.85
HDAC4-209ENST00000487617 ZC3H18Q86VM9 953 aaKnown RBP20.37■□□□□ 0.85
HDAC4-209ENST00000487617 NRSN1Q8IZ57 195 aa20.37■□□□□ 0.85
HDAC4-209ENST00000487617 FAM46DQ8NEK8 389 aa20.37■□□□□ 0.85
HDAC4-209ENST00000487617 DEPDC7Q96QD5 511 aa20.37■□□□□ 0.85
HDAC4-209ENST00000487617 RIOK2Q9BVS4 552 aaKnown RBP20.37■□□□□ 0.85
HDAC4-209ENST00000487617 FRMD8Q9BZ67 464 aaPredicted RBP20.37■□□□□ 0.85
HDAC4-209ENST00000487617 NRSN2Q9GZP1 204 aa20.37■□□□□ 0.85
HDAC4-209ENST00000487617 PCDHA3Q9Y5H8 950 aa20.37■□□□□ 0.85
HDAC4-209ENST00000487617 AK5Q9Y6K8 562 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms