RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 LYSMD4Q5XG99 296 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 HIBCHQ6NVY1 386 aaPredicted RBP13.22□□□□□ -0.29
HDAC1-208ENST00000482310 TTC30BQ8N4P2 665 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 ZCCHC9Q8N567 271 aaKnown RBP13.22□□□□□ -0.29
HDAC1-208ENST00000482310 PPHLN1Q8NEY8 458 aaKnown RBP13.22□□□□□ -0.29
HDAC1-208ENST00000482310 OR13C4Q8NGS5 318 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 SPOCK2Q92563 424 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 EID2BQ96D98 161 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 SERAC1Q96JX3 654 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 SLC6A18Q96N87 628 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 TRIM56Q9BRZ2 755 aaKnown RBP13.22□□□□□ -0.29
HDAC1-208ENST00000482310 AASDHPPTQ9NRN7 309 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 GRHL1Q9NZI5 618 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 PKD2L2Q9NZM6 624 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 WHRNQ9P202 907 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 MAD1L1Q9Y6D9 718 aa13.22□□□□□ -0.29
HDAC1-208ENST00000482310 PIKFYVEQ9Y2I7 2098 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 H0Y8X5 98 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 WNT9AO14904 365 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 STX7O15400 261 aaKnown RBP13.21□□□□□ -0.29
HDAC1-208ENST00000482310 LILRB5O75023 590 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 RHOBTB1O94844 696 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 CRTAMO95727 393 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 CNR2P34972 360 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 CDK16Q00536 496 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 CREB5Q02930 508 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 DHX9Q08211 1270 aaKnown RBP13.21□□□□□ -0.29
HDAC1-208ENST00000482310 HLTFQ14527 1009 aaKnown RBP eCLIP13.21□□□□□ -0.29
HDAC1-208ENST00000482310 TAF1AQ15573 450 aaPredicted RBP13.21□□□□□ -0.29
HDAC1-208ENST00000482310 NEK5Q6P3R8 708 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 CES3Q6UWW8 571 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 CYP2U1Q7Z449 544 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 C11orf74Q86VG3 221 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 HOOK3Q86VS8 718 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 CCDC25Q86WR0 208 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 PELI3Q8N2H9 469 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 BBOF1Q8ND07 529 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 CADM4Q8NFZ8 388 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 OR4K2Q8NGD2 314 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 BRSK1Q8TDC3 778 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 PIGKQ92643 395 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 SCAMP4Q969E2 229 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 DTD2Q96FN9 168 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 DNAJC1Q96KC8 554 aaKnown RBP13.21□□□□□ -0.29
HDAC1-208ENST00000482310 COQ10AQ96MF6 247 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 LYSMD1Q96S90 227 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 ARNT2Q9HBZ2 717 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 XAB2Q9HCS7 855 aaKnown RBP13.21□□□□□ -0.29
HDAC1-208ENST00000482310 MBNL1Q9NR56 388 aaKnown RBP13.21□□□□□ -0.29
HDAC1-208ENST00000482310 BFARQ9NZS9 450 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 HACD3Q9P035 362 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 SAMD15Q9P1V8 674 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 FKBPLQ9UIM3 349 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 RAB23Q9ULC3 237 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 PKP3Q9Y446 797 aa13.21□□□□□ -0.29
HDAC1-208ENST00000482310 RIF1Q5UIP0 2472 aaKnown RBP13.21□□□□□ -0.29
HDAC1-208ENST00000482310 FAM186AA6NE01 2351 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 C2orf81A6NN90 581 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 K7ESM1 405 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 GPR39O43194 453 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 BPIP17213 487 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 LPOP22079 712 aaPredicted RBP13.2□□□□□ -0.3
HDAC1-208ENST00000482310 HNRNPA2B1P22626 353 aaKnown RBP13.2□□□□□ -0.3
HDAC1-208ENST00000482310 AKT2P31751 481 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 IGFALSP35858 605 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 NBL1P41271 181 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 SPINT3P49223 89 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 CCR5P51681 352 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 MSLNQ13421 630 aaPredicted RBP13.2□□□□□ -0.3
HDAC1-208ENST00000482310 LRRC14Q15048 493 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 HIF1AQ16665 826 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 MSS51Q4VC12 460 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 GLE1Q53GS7 698 aaKnown RBP13.2□□□□□ -0.3
HDAC1-208ENST00000482310 RAET1GQ6H3X3 334 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 FAM151BQ6UXP7 276 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 TMC3Q7Z5M5 1100 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 PTAR1Q7Z6K3 402 aaPredicted RBP13.2□□□□□ -0.3
HDAC1-208ENST00000482310 ANKMY2Q8IV38 441 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 GSPT2Q8IYD1 628 aaKnown RBP13.2□□□□□ -0.3
HDAC1-208ENST00000482310 AGGF1Q8N302 714 aaeCLIP13.2□□□□□ -0.3
HDAC1-208ENST00000482310 TP53I13Q8NBR0 393 aaPredicted RBP13.2□□□□□ -0.3
HDAC1-208ENST00000482310 PLA2G15Q8NCC3 412 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 MCUQ8NE86 351 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 FOXJ1Q92949 421 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 AP2M1Q96CW1 435 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 CFAP36Q96G28 342 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 ZNF778Q96MU6 729 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 AGAP2Q99490 1192 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 RIOK2Q9BVS4 552 aaKnown RBP13.2□□□□□ -0.3
HDAC1-208ENST00000482310 SPATA16Q9BXB7 569 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 C1QTNF7Q9BXJ2 289 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 ABCG8Q9H221 673 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 TRABDQ9H4I3 376 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 SLC2A6Q9UGQ3 507 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 SMG5Q9UPR3 1016 aaKnown RBP13.2□□□□□ -0.3
HDAC1-208ENST00000482310 CHMP2BQ9UQN3 213 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 TCAF1Q9Y4C2 921 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 WDR87Q6ZQQ6 2873 aa13.2□□□□□ -0.3
HDAC1-208ENST00000482310 A0A1W2PPC4 97 aa13.19□□□□□ -0.3
HDAC1-208ENST00000482310 HEATR9A2RTY3 570 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms