RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 OMDQ99983 421 aa10.16□□□□□ -0.78
USP39-215ENST00000481409 LMAN1LQ9HAT1 526 aa10.16□□□□□ -0.78
USP39-215ENST00000481409 PCDH12Q9NPG4 1184 aa10.16□□□□□ -0.78
USP39-215ENST00000481409 ZDHHC4Q9NPG8 344 aa10.16□□□□□ -0.78
USP39-215ENST00000481409 PPANQ9NQ55 473 aaKnown RBP10.16□□□□□ -0.78
USP39-215ENST00000481409 INTS10Q9NVR2 710 aaKnown RBP10.16□□□□□ -0.78
USP39-215ENST00000481409 B4GALT6Q9UBX8 382 aa10.16□□□□□ -0.78
USP39-215ENST00000481409 SARDHQ9UL12 918 aa10.16□□□□□ -0.78
USP39-215ENST00000481409 CA14Q9ULX7 337 aa10.16□□□□□ -0.78
USP39-215ENST00000481409 ACTL7BQ9Y614 415 aa10.16□□□□□ -0.78
USP39-215ENST00000481409 ZNF106Q9H2Y7 1883 aaKnown RBP10.16□□□□□ -0.78
USP39-215ENST00000481409 F5P12259 2224 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 KRBA1A5PL33 1030 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 FAM170BA6NMN3 283 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 HMGB1P1B2RPK0 211 aaPredicted RBP10.15□□□□□ -0.78
USP39-215ENST00000481409 F8W8V4 182 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 AGPSO00116 658 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 FAM155BO75949 473 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 SASH3O75995 380 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 CLDN7O95471 211 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 SHBGP04278 402 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 ALPIP09923 528 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 ELFN1P0C7U0 828 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 ACADMP11310 421 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 CTPS1P17812 591 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 TARSP26639 723 aaKnown RBP10.15□□□□□ -0.78
USP39-215ENST00000481409 SPRP35270 261 aaPredicted RBP10.15□□□□□ -0.78
USP39-215ENST00000481409 DRD3P35462 400 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 SPAM1P38567 509 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 P2RY2P41231 377 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 PSMD8P48556 350 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 SPINT3P49223 89 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 TTPAP49638 278 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 ADARP55265 1226 aaKnown RBP10.15□□□□□ -0.78
USP39-215ENST00000481409 FAM193AP78312 1265 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 ZXDAP98168 799 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 PTSQ03393 145 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 CACNG1Q06432 222 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 MAP7D1Q3KQU3 841 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 KRT71Q3SY84 523 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 FASTKD1Q53R41 847 aaKnown RBP10.15□□□□□ -0.78
USP39-215ENST00000481409 TEDDM1Q5T9Z0 273 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 LRRC66Q68CR7 880 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 LIPIQ6XZB0 460 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 CAPN12Q6ZSI9 719 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 CCDC91Q7Z6B0 441 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 RASSF3Q86WH2 238 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 CTAGE3PQ8IX95 158 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 SIX5Q8N196 739 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 SPEM1Q8N4L4 309 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 CAMKK1Q8N5S9 505 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 C2CD4AQ8NCU7 369 aaPredicted RBP10.15□□□□□ -0.78
USP39-215ENST00000481409 OR6P1Q8NGX9 317 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 HEXDCQ8WVB3 486 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 ASB12Q8WXK4 309 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 HDAC10Q969S8 669 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 ARRDC3Q96B67 414 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 ULK4Q96C45 1275 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 SIPA1Q96FS4 1042 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 DNAJC1Q96KC8 554 aaKnown RBP10.15□□□□□ -0.78
USP39-215ENST00000481409 ZNF778Q96MU6 729 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 PAFAH2Q99487 392 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 MTG2Q9H4K7 406 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 PREBQ9HCU5 417 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 EURLQ9NYK6 297 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 NDRG2Q9UN36 371 aaKnown RBP10.15□□□□□ -0.78
USP39-215ENST00000481409 COMMD10Q9Y6G5 202 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 SLC30A1Q9Y6M5 507 aa10.15□□□□□ -0.78
USP39-215ENST00000481409 MYLKQ15746 1914 aa10.15□□□□□ -0.79
USP39-215ENST00000481409 GOLGA8CPA6NN73 597 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 AGAP14A8MT82 685 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 WNT9AO14904 365 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 MID1O15344 667 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 CD3EAPO15446 510 aaKnown RBP10.14□□□□□ -0.79
USP39-215ENST00000481409 RGS16O15492 202 aaPredicted RBP10.14□□□□□ -0.79
USP39-215ENST00000481409 PLRG1O43660 514 aaKnown RBP10.14□□□□□ -0.79
USP39-215ENST00000481409 ZNF217O75362 1048 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 GOT2P00505 430 aaKnown RBP10.14□□□□□ -0.79
USP39-215ENST00000481409 IGLV3-19P01714 112 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 SNRPAP09012 282 aaKnown RBP10.14□□□□□ -0.79
USP39-215ENST00000481409 ERVK-10P10266 1014 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 ITGALP20701 1170 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 LHCGRP22888 699 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 ARNTP27540 789 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 TEAD1P28347 426 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 OXTRP30559 389 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 NUDT1P36639 197 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 LEPRP48357 1165 aaKnown RBP10.14□□□□□ -0.79
USP39-215ENST00000481409 DPTQ07507 201 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 SIGLEC14Q08ET2 396 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 CNTN1Q12860 1018 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 RALGDSQ12967 914 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 UBXN2BQ14CS0 331 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 TYSND1Q2T9J0 566 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 HSP90AA5PQ58FG0 334 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 TNFAIP8L3Q5GJ75 292 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 TJAP1Q5JTD0 557 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 IER5LQ5T953 404 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 PIP5KL1Q5T9C9 394 aa10.14□□□□□ -0.79
USP39-215ENST00000481409 AGBL4Q5VU57 503 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 349.9 ms