RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 MARCOQ9UEW3 520 aaPredicted RBP9.94□□□□□ -0.82
PTPRD-207ENST00000463477 TCAF1Q9Y4C2 921 aa9.94□□□□□ -0.82
PTPRD-207ENST00000463477 SLC12A8A0AV02 714 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 PRR5-ARHGAP8B1AHC4 643 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 E9PAM4 449 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 DFFAO00273 331 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 SLC22A2O15244 555 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 LYPLA1O75608 230 aaPredicted RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 LUC7L3O95232 432 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 PSMG1O95456 288 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ADH1CP00326 375 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 KLKB1P03952 638 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 PAMP19021 973 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 OPRD1P41143 372 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ARCN1P48444 511 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 IDH3AP50213 366 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 IRX4P78413 519 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ARHGAP8P85298 464 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ASPHQ12797 758 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 SLC12A1Q13621 1099 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ITGA9Q13797 1035 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 HNRNPDQ14103 355 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 FBXO43Q4G163 708 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 KHDC1Q4VXA5 237 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ACSBG2Q5FVE4 666 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 C6orf163Q5TEZ5 329 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 EPGNQ6UW88 154 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 MAVSQ7Z434 540 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 TMEM25Q86YD3 366 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 SCUBE1Q8IWY4 988 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ZNF683Q8IZ20 524 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 GABPB2Q8TAK5 448 aaPredicted RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 PDCD6IPQ8WUM4 868 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 PLD4Q96BZ4 506 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 TSNARE1Q96NA8 513 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 FAM167BQ9BTA0 163 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 SIK2Q9H0K1 926 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 CDH19Q9H159 772 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 SLC25A51Q9H1U9 297 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 GPAMQ9HCL2 828 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ATP13A1Q9HD20 1204 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 VPS45Q9NRW7 570 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 TREX1Q9NSU2 369 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 IL1RAPL1Q9NZN1 696 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 SFMBT1Q9UHJ3 866 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 TLK1Q9UKI8 766 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 HELZP42694 1942 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 COL4A3Q01955 1670 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 KMT2EQ8IZD2 1858 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ANKRD36A6QL64 1941 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 IGLV3-10A0A075B6K4 115 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 TARM1B6A8C7 271 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 SLCO1B7G3V0H7 640 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 H0Y858 1186 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 SCAMP3O14828 347 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 HOXC11O43248 304 aaPredicted RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 PAPSS2O95340 614 aaPredicted RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 HLA-DQB2P05538 268 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ADH5P11766 374 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 RHOQP17081 205 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 CRABP2P29373 138 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ADSLP30566 484 aaPredicted RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ARRB2P32121 409 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 CPOXP36551 454 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 VHLP40337 213 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 PTDSS1P48651 473 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 KPNA2P52292 529 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ALDH18A1P54886 795 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 GAS6Q14393 721 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 GRM3Q14832 879 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 KPNB1Q14974 876 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ANGPT1Q15389 498 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 TSNAXIP1Q2TAA8 658 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 FSCBQ5H9T9 825 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 LIPMQ5VYY2 423 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 KDELC1Q6UW63 502 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ARHGAP36Q6ZRI8 547 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 MAML2Q8IZL2 1156 aaPredicted RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 TMEM151AQ8N4L1 468 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 SPEM1Q8N4L4 309 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 STYXQ8WUJ0 223 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 CMTM5Q96DZ9 223 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ZNF570Q96NI8 536 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 APOL2Q9BQE5 337 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ACE2Q9BYF1 805 aaPredicted RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 DRC3Q9H069 523 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 RETREG1Q9H6L5 497 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 PNPOQ9NVS9 261 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 TMEM248Q9NWD8 314 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 MARK1Q9P0L2 795 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 ZNF212Q9UDV6 495 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 STOML2Q9UJZ1 356 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 FBXO4Q9UKT5 387 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 AGO1Q9UL18 857 aaKnown RBP9.93□□□□□ -0.82
PTPRD-207ENST00000463477 RAP2CQ9Y3L5 183 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 HS3ST4Q9Y661 456 aa9.93□□□□□ -0.82
PTPRD-207ENST00000463477 A0A087X1B8 175 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 LAMTOR5O43504 91 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 ABCB7O75027 752 aa9.92□□□□□ -0.82
PTPRD-207ENST00000463477 CIB2O75838 187 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms