RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CAMK2DQ13557 499 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 CDC37Q16543 378 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 NTRK2Q16620 822 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 GSTA3Q16772 222 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 ZNF805Q5CZA5 627 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 TMEM198Q66K66 360 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 ATG9BQ674R7 924 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 JADE1Q6IE81 842 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 TMEM154Q6P9G4 183 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 SHQ1Q6PI26 577 aaKnown RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 QSOX2Q6ZRP7 698 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 PRSS45Q7RTY3 260 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 NOXA1Q86UR1 476 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 WDR5BQ86VZ2 330 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 DNAAF5Q86Y56 855 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 FAM217AQ8IXS0 508 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 ZDHHC23Q8IYP9 409 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 C11orf65Q8NCR3 313 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 CMASQ8NFW8 434 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 DUSP19Q8WTR2 217 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 PRPF31Q8WWY3 499 aaKnown RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 SMARCE1Q969G3 411 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 SNX21Q969T3 373 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 VMP1Q96GC9 406 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 SF3B5Q9BWJ5 86 aaKnown RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 C1QTNF5Q9BXJ0 243 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 RBM38Q9H0Z9 239 aaKnown RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 PLK3Q9H4B4 646 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 PLEKHA4Q9H4M7 779 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 RABEP2Q9H5N1 569 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 PDZD7Q9H5P4 517 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 KRCC1Q9NPI7 259 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 SIRT3Q9NTG7 399 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 BABAM1Q9NWV8 329 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 CHCHD3Q9NX63 227 aaKnown RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 CPSF2Q9P2I0 782 aaKnown RBP3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 CLDN16Q9Y5I7 305 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 SESN1Q9Y6P5 492 aa3.04□□□□□ -1.92
HMGB1P9-201ENST00000429856 MST1RQ04912 1400 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 hCG_1809904A0A1W2PP81 198 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 A0A1W2PPE2 198 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 RPS10-NUDT3A0A1W2PQS6 291 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 A0A1W2PR64 198 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 LRRC53A6NM62 1247 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 EIF3CLB5ME19 914 aaKnown RBP3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 H0Y626 953 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 H0YGN5 161 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 TAF4O00268 1085 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 PLRG1O43660 514 aaKnown RBP3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 GGPS1O95749 300 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 UNGP13051 313 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 ARSBP15848 533 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 IFNAR1P17181 557 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 TRIM21P19474 475 aaKnown RBP3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 YWHAQP27348 245 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 TNFSF8P32971 234 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 RFX2P48378 723 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 CAMPP49913 170 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 ENTPD1P49961 510 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 SUOXP51687 545 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 GALCP54803 685 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 RRP1P56182 461 aaKnown RBP3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 MRPS5P82675 430 aaKnown RBP3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 SLC18A2Q05940 514 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 GOLGA8DPQ0D2H9 430 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 C17orf67Q0P5P2 114 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 AIMP2Q13155 320 aaKnown RBP3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 PRPF4BQ13523 1007 aaKnown RBP3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 PKP1Q13835 747 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 IL11RAQ14626 422 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 ADIPOQQ15848 244 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 NCAPH2Q6IBW4 605 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 SARM1Q6SZW1 724 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 IL20RBQ6UXL0 311 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 GLDNQ6ZMI3 551 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 SLC16A12Q6ZSM3 486 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 GPSM1Q86YR5 675 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 TMC8Q8IU68 726 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 THNSL1Q8IYQ7 743 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 KIAA2013Q8IYS2 634 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 CADM3Q8N126 398 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 OR8H3Q8N146 312 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 CARNMT1Q8N4J0 409 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 LRRC57Q8N9N7 239 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 KDM1BQ8NB78 822 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 POGLUT1Q8NBL1 392 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 C7orf57Q8NEG2 295 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 POMGNT1Q8WZA1 660 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 TMCO6Q96DC7 493 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 SAT2Q96F10 170 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 PGAM5Q96HS1 289 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 PPP1R13BQ96KQ4 1090 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 LINC00615Q96LM1 132 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 FER1L6-AS2Q96M78 137 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 DGAT2Q96PD7 388 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 OR2A14Q96R47 310 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 FNBP1Q96RU3 617 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 ISCUQ9H1K1 167 aa3.03□□□□□ -1.92
HMGB1P9-201ENST00000429856 RETREG1Q9H6L5 497 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms