RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 DFNA5O60443 496 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 BUB1BO60566 1050 aaPredicted RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 FAM228BP0C875 321 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 GIMD1P0DJR0 217 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 ERCC2P18074 760 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 AKT2P31751 481 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 ARRB1P49407 418 aaPredicted RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 AIF1P55008 147 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 RHOAP61586 193 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 SNRPD1P62314 119 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 RPS21P63220 83 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 PPIDQ08752 370 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 PARP15Q460N3 678 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 BOLA3Q53S33 107 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 TDRD12Q587J7 1177 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 SLC45A4Q5BKX6 768 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 CFAP157Q5JU67 520 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 ERMARDQ5T6L9 678 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 AFMIDQ63HM1 303 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 Q6ZSR6 202 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 RFX8Q6ZV50 586 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 TMPRSS7Q7RTY8 843 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 PTAR1Q7Z6K3 402 aaPredicted RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 TSEN2Q8NCE0 465 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 DYDC1Q8WWB3 177 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 GDAP1L1Q96MZ0 367 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 WRAP53Q9BUR4 548 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 CENPHQ9H3R5 247 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 CATSPERBQ9H7T0 1116 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 GPR27Q9NS67 375 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 PCMTD2Q9NV79 361 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 BOD1L1Q8NFC6 3051 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 GOLGA4Q13439 2230 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 GOLGA6L10A0A0M3HER8 536 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 CXorf51AA0A1B0GTR3 108 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 A0A1W2PQJ5 194 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 DFFAO00273 331 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 AREL1O15033 823 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 FFAR2O15552 330 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 AP1G1O43747 822 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 PRPSAP2O60256 369 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 PRAMEF11O60813 436 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 MMP20O60882 483 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 POP4O95707 220 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 LDOC1O95751 146 aaPredicted RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 IGSF6O95976 241 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 TIMP2P16035 220 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 DGKAP23743 735 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 NUDT1P36639 197 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 ACADVLP49748 655 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 PMS2P54278 862 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 GEMIN4P57678 1058 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 YBEYP58557 167 aaPredicted RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 MRPS35P82673 323 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 XRCC4Q13426 336 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 DPYSQ14117 519 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 FZD2Q14332 565 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 SMAD1Q15797 465 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 INO80DQ53TQ3 878 aaPredicted RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 CCDC122Q5T0U0 273 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 C6orf132Q5T0Z8 1188 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 KIAA1161Q6NSJ0 714 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 CCDC121Q6ZUS5 278 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 NEK10Q6ZWH5 1172 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 PPP1R14CQ8TAE6 165 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 FNIP1Q8TF40 1166 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 HSPH1Q92598 858 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 NR1H4Q96RI1 486 aaPredicted RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 C1QTNF2Q9BXJ5 285 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 EDEM3Q9BZQ6 932 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 XPO4Q9C0E2 1151 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 MBNL1Q9NR56 388 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 NOP53Q9NZM5 478 aaKnown RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 UBA2Q9UBT2 640 aaPredicted RBP9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 COQ6Q9Y2Z9 468 aa9.74□□□□□ -0.85
NIF3L1-202ENST00000409020 CFAP46Q8IYW2 2715 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 SPENQ96T58 3664 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 ACACAQ13085 2346 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 TRPM6Q9BX84 2022 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 ZSCAN5CA6NGD5 496 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 NEMP1O14524 444 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 CASC3O15234 703 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 SIGLEC6O43699 453 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 DNAJC8O75937 253 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 CD48P09326 243 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 CASP14P31944 242 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 CCNG1P51959 295 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 MXRA7P84157 204 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 KIF5AQ12840 1032 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 OVGP1Q12889 678 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 CASP8Q14790 479 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 PROX2Q3B8N5 592 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 KYAT3Q6YP21 454 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 TTC7BQ86TV6 843 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 VPS36Q86VN1 386 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 CAMK1DQ8IU85 385 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 ACMSDQ8TDX5 336 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 LRIG1Q96JA1 1093 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms