RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 RGS9BPQ6ZS82 235 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 MICALCLQ6ZW33 695 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 CPLX4Q7Z7G2 160 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 LDB1Q86U70 411 aaPredicted RBP26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 LCA5Q86VQ0 697 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 SLC41A1Q8IVJ1 513 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 HCAR2Q8TDS4 363 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 EID2BQ96D98 161 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 NUMBLQ9Y6R0 609 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 KIAA1549LQ6ZVL6 1849 aa26.27■■□□□ 1.8
ATPAF1-202ENST00000371937 TCP11X1B4DZS4 312 aa26.27■■□□□ 1.8
ATPAF1-202ENST00000371937 AARS2Q5JTZ9 985 aaKnown RBP26.27■■□□□ 1.8
ATPAF1-202ENST00000371937 TSPAN17Q96FV3 270 aa26.27■■□□□ 1.8
ATPAF1-202ENST00000371937 GAS2L1Q99501 681 aaPredicted RBP26.27■■□□□ 1.8
ATPAF1-202ENST00000371937 OMDQ99983 421 aa26.27■■□□□ 1.8
ATPAF1-202ENST00000371937 RABEP2Q9H5N1 569 aa26.27■■□□□ 1.8
ATPAF1-202ENST00000371937 BRD9Q9H8M2 597 aa26.27■■□□□ 1.8
ATPAF1-202ENST00000371937 EDDM13A0A1B0GTR0 161 aa26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 ARNTLO00327 626 aa26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 CLDN7O95471 211 aa26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 FOXN2P32314 431 aa26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 GRIA2P42262 883 aa26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 SERPINB4P48594 390 aa26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 ZKSCAN8Q15776 578 aaPredicted RBP26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 HNRNPA1L2Q32P51 320 aaKnown RBP26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 LRRC8CQ8TDW0 803 aa26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 FAM107BQ9H098 131 aa26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 NSRP1Q9H0G5 558 aaKnown RBP26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 SZT2Q5T011 3432 aa26.26■■□□□ 1.79
ATPAF1-202ENST00000371937 COL4A3Q01955 1670 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 A0A0U1RQS6 177 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 NPIPB15A6NHN6 443 aaPredicted RBP26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 ANHXE9PGG2 379 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 KAT7O95251 611 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 COL6A2P12110 1019 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 BMP1P13497 986 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 TAC1P20366 129 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 TTPAP49638 278 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 PEX6Q13608 980 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 HTR4Q13639 388 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 SEMA3AQ14563 771 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 RNF187Q5TA31 235 aaPredicted RBP26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 N4BP2L1Q5TBK1 243 aaPredicted RBP26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 CRTC1Q6UUV9 634 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 CLEC14AQ86T13 490 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 LRRC34Q8IZ02 419 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 ARMC2Q8NEN0 867 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 TSNARE1Q96NA8 513 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 MTG2Q9H4K7 406 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 DKK3Q9UBP4 350 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 APPL1Q9UKG1 709 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 ACOT9Q9Y305 439 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 SLC30A1Q9Y6M5 507 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 TSPAN11A1L157 253 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 PTPN5P54829 565 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 TAS2R39P59534 338 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 CACNG1Q06432 222 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 ZNF234Q14588 700 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 CCDC153Q494R4 210 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 ZNF805Q5CZA5 627 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 CBARPQ8N350 705 aaPredicted RBP26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 CRYL1Q9Y2S2 319 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 VWA7Q9Y334 891 aa26.25■■□□□ 1.79
ATPAF1-202ENST00000371937 NDUFS3O75489 264 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 TOP3BO95985 862 aaKnown RBP26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 PRNPP04156 253 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 APODP05090 189 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 SLC35E2BP0CK96 405 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 DRD4P21917 467 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 XIAPP98170 497 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 ZRANB3Q5FWF4 1079 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 RBM20Q5T481 1227 aaKnown RBP26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 HECTD2Q5U5R9 776 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 NAIF1Q69YI7 327 aaPredicted RBP26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 FAM45BPQ6NSW5 357 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 SERPINA13PQ6UXR4 307 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 CCDC91Q7Z6B0 441 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 ZNF366Q8N895 744 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 FAM45AQ8TCE6 357 aa26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 COLQQ9Y215 455 aaPredicted RBP26.24■■□□□ 1.79
ATPAF1-202ENST00000371937 WDR91A4D1P6 747 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 PHGDHO43175 533 aaKnown RBP26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 CTSLP07711 333 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 CYP2A6P11509 494 aaPredicted RBP26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 CEP97Q8IW35 865 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 CCDC63Q8NA47 563 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 CSGALNACT1Q8TDX6 532 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 ZNF75CPQ92670 426 aaPredicted RBP26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 CHFRQ96EP1 664 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 NDNQ99608 321 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 TMEM245Q9H330 911 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 CAMSAP3Q9P1Y5 1249 aaPredicted RBP26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 FNDC3AQ9Y2H6 1198 aaKnown RBP26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 A0A087X1B8 175 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 BIRC5O15392 142 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 PLIN3O60664 434 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 NEFHP12036 1026 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 E2F5Q15329 346 aa26.23■■□□□ 1.79
ATPAF1-202ENST00000371937 LRRC66Q68CR7 880 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms