RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 RPS24P62847 133 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 CRADDP78560 199 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 NIPAL4Q0D2K0 466 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 ACACAQ13085 2346 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 ZNF177Q13360 481 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 ZNF235Q14590 738 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 LBRQ14739 615 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 SLC14A2Q15849 920 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 TTC19Q6DKK2 380 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 DBX2Q6ZNG2 339 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 ZNF771Q7L3S4 317 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 PRPF39Q86UA1 669 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 CFAP52Q8N1V2 620 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 IPMKQ8NFU5 416 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 SPATA22Q8NHS9 363 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 PTCD2Q8WV60 388 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 MTBPQ96DY7 904 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 MRRFQ96E11 262 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 IMP4Q96G21 291 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 SGSM3Q96HU1 749 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 FICDQ9BVA6 458 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 FSD1LQ9BXM9 530 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 EPN3Q9H201 632 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 CCDC134Q9H6E4 229 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 MRM3Q9HC36 420 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 KCNK9Q9NPC2 374 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 NKIRAS1Q9NYS0 192 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 WSB2Q9NYS7 404 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 UBP1Q9NZI7 540 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 USP36Q9P275 1121 aaKnown RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 TBC1D30Q9Y2I9 924 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 CKAP5Q14008 2032 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 TMEM131Q92545 1883 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 FAM47DPA6NHR8 397 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 NEDD8-MDP1E9PL57 170 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 FAM155BO75949 473 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 KRT38O76015 456 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 MT-CYBP00156 380 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 SNRPAP09012 282 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 CISD3P0C7P0 127 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 TYRP14679 529 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 OXCT1P55809 520 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 MGAT5Q09328 741 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 SLC10A7Q0GE19 358 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 OLIG2Q13516 323 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 RFTN1Q14699 578 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 ALG1LQ6GMV1 187 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 TRMT10BQ6PF06 316 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 KDELC1Q6UW63 502 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 TMEM135Q86UB9 458 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 CPXM2Q8N436 756 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 CADM4Q8NFZ8 388 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 ZNF669Q96BR6 464 aaPredicted RBP13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 ERLEC1Q96DZ1 483 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 CERS2Q96G23 380 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 MRGPRX2Q96LB1 330 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 BBS2Q9BXC9 721 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 POLR1EQ9GZS1 481 aaKnown RBP13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 IL21RQ9HBE5 538 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 CACNA2D2Q9NY47 1150 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 FBXO10Q9UK96 956 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 RPS6KL1Q9Y6S9 549 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 FAM169AQ9Y6X4 670 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 APC2O95996 2303 aa13.55□□□□□ -0.24
HERPUD1-202ENST00000344114 CXorf49A8MYA2 514 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 WASH3PC4AMC7 463 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 KDELR3O43731 214 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 CREB1P16220 341 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 SGSHP51688 502 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 BNC1Q01954 994 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 ITKQ08881 620 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 PCID2Q5JVF3 399 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 CERCAMQ5T4B2 595 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 KIAA1324Q6UXG2 1013 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 PPHLN1Q8NEY8 458 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 OR7D4Q8NG98 312 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 TADA1Q96BN2 335 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 TOE1Q96GM8 510 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 APOL2Q9BQE5 337 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 KIFC1Q9BW19 673 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 GAREM1Q9H706 876 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 ARNT2Q9HBZ2 717 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 ATP13A1Q9HD20 1204 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 ITM2CQ9NQX7 267 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 SMYD2Q9NRG4 433 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 TM7SF3Q9NS93 570 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 PIH1D1Q9NWS0 290 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 UBA2Q9UBT2 640 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 SEPT3Q9UH03 358 aa13.54□□□□□ -0.24
HERPUD1-202ENST00000344114 A0A0D9SEW6 157 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 MEI4A8MW99 385 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 FOXO6A8MYZ6 492 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 ATP9BO43861 1147 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 TSPAN3O60637 253 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 TBL1XO60907 577 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 PMPCBO75439 489 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 ZWINTO95229 277 aa13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 LUC7L3O95232 432 aaKnown RBP13.53□□□□□ -0.24
HERPUD1-202ENST00000344114 CER1O95813 267 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms