RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 PROSCO94903 275 aa25.2■■□□□ 1.62
U2AF1-201ENST00000291552 TNFSF15O95150 251 aa25.2■■□□□ 1.62
U2AF1-201ENST00000291552 TMPRSS3P57727 454 aa25.2■■□□□ 1.62
U2AF1-201ENST00000291552 CDK3Q00526 305 aa25.2■■□□□ 1.62
U2AF1-201ENST00000291552 TMPRSS9Q7Z410 1059 aa25.2■■□□□ 1.62
U2AF1-201ENST00000291552 SPRED1Q7Z699 444 aa25.2■■□□□ 1.62
U2AF1-201ENST00000291552 LRRC49Q8IUZ0 686 aa25.2■■□□□ 1.62
U2AF1-201ENST00000291552 PQLC3Q8N755 202 aa25.2■■□□□ 1.62
U2AF1-201ENST00000291552 Q8N9G6 341 aaPredicted RBP25.2■■□□□ 1.62
U2AF1-201ENST00000291552 GPBAR1Q8TDU6 330 aa25.2■■□□□ 1.62
U2AF1-201ENST00000291552 FAF2Q96CS3 445 aa25.2■■□□□ 1.62
U2AF1-201ENST00000291552 DPH1Q9BZG8 443 aa25.2■■□□□ 1.62
U2AF1-201ENST00000291552 XPO4Q9C0E2 1151 aaKnown RBP25.2■■□□□ 1.62
U2AF1-201ENST00000291552 SUDS3Q9H7L9 328 aaPredicted RBP25.2■■□□□ 1.62
U2AF1-201ENST00000291552 SPATS2LQ9NUQ6 558 aaKnown RBP25.2■■□□□ 1.62
U2AF1-201ENST00000291552 ATXN7L1Q9ULK2 861 aaPredicted RBP25.2■■□□□ 1.62
U2AF1-201ENST00000291552 COL6A6A6NMZ7 2263 aa25.19■■□□□ 1.62
U2AF1-201ENST00000291552 GOLGA6L19H0YKK7 550 aa25.19■■□□□ 1.62
U2AF1-201ENST00000291552 GLB1P16278 677 aa25.19■■□□□ 1.62
U2AF1-201ENST00000291552 TEAD1P28347 426 aa25.19■■□□□ 1.62
U2AF1-201ENST00000291552 MLLT3P42568 568 aaPredicted RBP25.19■■□□□ 1.62
U2AF1-201ENST00000291552 DSC2Q02487 901 aa25.19■■□□□ 1.62
U2AF1-201ENST00000291552 HADHQ16836 314 aaKnown RBP25.19■■□□□ 1.62
U2AF1-201ENST00000291552 ANKRD20A8PQ5CZ79 823 aa25.19■■□□□ 1.62
U2AF1-201ENST00000291552 USP45Q70EL2 814 aa25.19■■□□□ 1.62
U2AF1-201ENST00000291552 ZNF670Q9BS34 389 aa25.19■■□□□ 1.62
U2AF1-201ENST00000291552 KCTD5Q9NXV2 234 aa25.19■■□□□ 1.62
U2AF1-201ENST00000291552 CTTNBP2NLQ9P2B4 639 aa25.19■■□□□ 1.62
U2AF1-201ENST00000291552 ZNF462Q96JM2 2506 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 EIF4E1BA6NMX2 242 aaKnown RBP25.18■■□□□ 1.62
U2AF1-201ENST00000291552 PDE2AO00408 941 aaPredicted RBP25.18■■□□□ 1.62
U2AF1-201ENST00000291552 PLD2O14939 933 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 ITGA2BP08514 1039 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 HGFP14210 728 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 CCNB1P14635 433 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 CCKBRP32239 447 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 UGT1A5P35504 534 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 POLD2P49005 469 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 UCNP55089 124 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 INHBCP55103 352 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 MAZP56270 477 aaKnown RBP25.18■■□□□ 1.62
U2AF1-201ENST00000291552 TSR1Q2NL82 804 aaKnown RBP25.18■■□□□ 1.62
U2AF1-201ENST00000291552 ASTE1Q2TB18 679 aaPredicted RBP25.18■■□□□ 1.62
U2AF1-201ENST00000291552 ARHGAP40Q5TG30 622 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 BROXQ5VW32 411 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 LRRC66Q68CR7 880 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 RAET1GQ6H3X3 334 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 C17orf82Q86X59 251 aaPredicted RBP25.18■■□□□ 1.62
U2AF1-201ENST00000291552 ARL14Q8N4G2 192 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 POLR1EQ9GZS1 481 aaKnown RBP25.18■■□□□ 1.62
U2AF1-201ENST00000291552 DPEP2Q9H4A9 486 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 CD84Q9UIB8 345 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 SUFUQ9UMX1 484 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 SLC17A4Q9Y2C5 497 aa25.18■■□□□ 1.62
U2AF1-201ENST00000291552 A0A0J9YYE9 177 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 MATN3O15232 486 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 PRLP01236 227 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 TRBC1P01850 177 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 PNLIPP16233 465 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 NFKBIAP25963 317 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 AK4P27144 223 aaPredicted RBP25.17■■□□□ 1.62
U2AF1-201ENST00000291552 GNPDA1P46926 289 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 GBE1Q04446 702 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 DPTQ07507 201 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 SLC10A2Q12908 348 aaPredicted RBP25.17■■□□□ 1.62
U2AF1-201ENST00000291552 ARHGEF7Q14155 803 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 ZSCAN23Q3MJ62 389 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 RAB11FIP2Q7L804 512 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.17■■□□□ 1.62
U2AF1-201ENST00000291552 ARRDC2Q8TBH0 407 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 FATE1Q969F0 183 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 TSGA13Q96PP4 275 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 ABCG8Q9H221 673 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 LRIT1Q9P2V4 623 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 UVRAGQ9P2Y5 699 aa25.17■■□□□ 1.62
U2AF1-201ENST00000291552 GOLGA6CA6NDK9 693 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 GOLGA6BA6NDN3 693 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 TK2O00142 265 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 NUDT21O43809 227 aaKnown RBP25.16■■□□□ 1.62
U2AF1-201ENST00000291552 FGF1P05230 155 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 HLA-DQB2P05538 268 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 GOLGA6DP0CG33 693 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 B4GALNT1Q00973 533 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 ZFP36L1Q07352 338 aaKnown RBP25.16■■□□□ 1.62
U2AF1-201ENST00000291552 ITKQ08881 620 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 NIPAL4Q0D2K0 466 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 CLN3Q13286 438 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 PDK2Q15119 407 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 SLC18A3Q16572 532 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 SLITRK4Q8IW52 837 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 FBXO39Q8N4B4 442 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 LSM14AQ8ND56 463 aaKnown RBP25.16■■□□□ 1.62
U2AF1-201ENST00000291552 SCAMP4Q969E2 229 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 TDRD1Q9BXT4 1180 aaKnown RBP25.16■■□□□ 1.62
U2AF1-201ENST00000291552 PIEZO2Q9H5I5 2752 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 TRNAU1APQ9NX07 287 aaKnown RBP25.16■■□□□ 1.62
U2AF1-201ENST00000291552 GOLGA6AQ9NYA3 693 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 TAAR2Q9P1P5 351 aa25.16■■□□□ 1.62
U2AF1-201ENST00000291552 IVLP07476 585 aa25.15■■□□□ 1.62
U2AF1-201ENST00000291552 PTSQ03393 145 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms