RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 OR1D2P34982 312 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CPA2P48052 419 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 PSME3P61289 254 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 HERVK_113P63132 956 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 PLOD1Q02809 727 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 BLMHQ13867 455 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 C10orf62Q5T681 223 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 RIPOR1Q6ZS17 1223 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CDHR3Q6ZTQ4 885 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SCD5Q86SK9 330 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ARHGAP12Q8IWW6 846 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 PACRGLQ8N7B6 248 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 GLB1L3Q8NCI6 653 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SCAMP5Q8TAC9 235 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 UCMAQ8WVF2 138 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ERVK-6Q9BXR3 956 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 PRDM5Q9NQX1 630 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 TRMT13Q9NUP7 481 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 NDFIP2Q9NV92 336 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 BLOC1S6Q9UL45 172 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 LCHNA4D1U4 455 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 KERAO60938 352 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CBSLP0DN79 551 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CBSP35520 551 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SMAD3P84022 425 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SFSWAPQ12872 951 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 RBBP7Q16576 425 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 GPRIN1Q7Z2K8 1008 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 DHFR2Q86XF0 187 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CILP2Q8IUL8 1156 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CMTR2Q8IYT2 770 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 HERC2P3Q9BVR0 1158 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 R3HDMLQ9H3Y0 253 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 MID1IP1Q9NPA3 183 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CDH22Q9UJ99 828 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 MYH11P35749 1972 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 GALTP07902 379 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ENO2P09104 434 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 HDCP19113 662 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 SLC11A1P49279 550 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ATP6AP1LQ52LC2 224 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 C14orf80Q86SX3 495 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 RAB42Q8N4Z0 105 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 EXT2Q93063 718 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 PSMG2Q969U7 264 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 KIAA1191Q96A73 305 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CCDC124Q96CT7 223 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 TUBGCP5Q96RT8 1024 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 FIS1Q9Y3D6 152 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 GSTA4O15217 222 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ENTPD5O75356 428 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CORO1AP31146 461 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CD68P34810 354 aaPredicted RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 DUSP4Q13115 394 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 PRKG2Q13237 762 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 AFMIDQ63HM1 303 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 KDELC1Q6UW63 502 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 IZUMO2Q6UXV1 221 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 ALYREFQ86V81 257 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 NDRG1Q92597 394 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 PGLYRP2Q96PD5 576 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 LPIN3Q9BQK8 851 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 LATS2Q9NRM7 1088 aa4.56□□□□□ -1.68
SCN1A-210ENST00000635776 CNOT11Q9UKZ1 510 aaKnown RBP4.56□□□□□ -1.68
SCN1A-210ENST00000635776 AQP12BA6NM10 295 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 FAM72CH0Y354 149 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 ANXA5P08758 320 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 ADRA1AP35348 466 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 MRPL58Q14197 206 aaKnown RBP4.55□□□□□ -1.68
SCN1A-210ENST00000635776 C5orf22Q49AR2 442 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 FAM72AQ5TYM5 149 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 FAM72DQ6L9T8 149 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 KDELC2Q7Z4H8 507 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 FAM72BQ86X60 149 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 AQP12AQ8IXF9 295 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 TRIML2Q8N7C3 387 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 DTX3LQ8TDB6 740 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 NXNL1Q96CM4 212 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 REPS1Q96D71 796 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 SGF29Q96ES7 293 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 MYO19Q96H55 970 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 CDKN2AIPNLQ96HQ2 116 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 MRGPRX2Q96LB1 330 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 CDRT15Q96T59 188 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 WWOXQ9NZC7 414 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 RAB26Q9ULW5 256 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 LOC285095A0A1B0GVY8 99 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 GRM6O15303 877 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 MT-CYBP00156 380 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-210ENST00000635776 UROSP10746 265 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 ELNP15502 786 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 SLC10A7Q0GE19 358 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF284Q2VY69 593 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 LSM12Q3MHD2 195 aaKnown RBP4.55□□□□□ -1.68
SCN1A-210ENST00000635776 OTUD1Q5VV17 481 aaPredicted RBP4.55□□□□□ -1.68
SCN1A-210ENST00000635776 TLDC1Q6P9B6 456 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 GPSM1Q86YR5 675 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 SPATA22Q8NHS9 363 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 L3HYPDHQ96EM0 354 aa4.55□□□□□ -1.68
SCN1A-210ENST00000635776 AARSD1Q9BTE6 412 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms