RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SPINT1O43278 529 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 LZTS3O60299 673 aaPredicted RBP18.32■□□□□ 0.52
RFFL-211ENST00000584541 RNGTTO60942 597 aaKnown RBP18.32■□□□□ 0.52
RFFL-211ENST00000584541 NDUFS2O75306 463 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 ECHS1P30084 290 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 ACSL1P33121 698 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 HMGCLP35914 325 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 LIG3P49916 1009 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 RPS21P63220 83 aaKnown RBP18.32■□□□□ 0.52
RFFL-211ENST00000584541 CRADDP78560 199 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 CBLBQ13191 982 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 ACOX1Q15067 660 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 ELF2Q15723 593 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 CDKN3Q16667 212 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 MSS51Q4VC12 460 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 CCDC38Q502W7 563 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 LIPIQ6XZB0 460 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 SLC36A4Q6YBV0 504 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 CCNI2Q6ZMN8 369 aaPredicted RBP18.32■□□□□ 0.52
RFFL-211ENST00000584541 TMC3Q7Z5M5 1100 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 WDR5BQ86VZ2 330 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 LONP2Q86WA8 852 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 RAVER1Q8IY67 606 aaKnown RBP18.32■□□□□ 0.52
RFFL-211ENST00000584541 ZBED8Q8IZ13 594 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 MPP5Q8N3R9 675 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 TTC30BQ8N4P2 665 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 STYXQ8WUJ0 223 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 RLN3Q8WXF3 142 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 TOE1Q96GM8 510 aaKnown RBP18.32■□□□□ 0.52
RFFL-211ENST00000584541 C1QTNF1Q9BXJ1 281 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 FAM126AQ9BYI3 521 aaPredicted RBP18.32■□□□□ 0.52
RFFL-211ENST00000584541 RAD18Q9NS91 495 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 WSB2Q9NYS7 404 aaPredicted RBP18.32■□□□□ 0.52
RFFL-211ENST00000584541 SOX13Q9UN79 622 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 ARL5AQ9Y689 179 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 CACNA1IQ9P0X4 2223 aa18.32■□□□□ 0.52
RFFL-211ENST00000584541 ZNF106Q9H2Y7 1883 aaKnown RBP18.31■□□□□ 0.52
RFFL-211ENST00000584541 IGHV1OR15-9A0A0B4J2B8 117 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 AURKAO14965 403 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 LDB2O43679 373 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 MMP20O60882 483 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 TM7SF2O76062 418 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 HADHAP40939 763 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 ELK3P41970 407 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 FNTBP49356 437 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 STC1P52823 247 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 NUBP1P53384 320 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 VSNL1P62760 191 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 PTSQ03393 145 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 NAA30Q147X3 362 aaPredicted RBP18.31■□□□□ 0.52
RFFL-211ENST00000584541 SLMAPQ14BN4 828 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 SKIDA1Q1XH10 827 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 MAP7D1Q3KQU3 841 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 TMEM31Q5JXX7 168 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 TSTD2Q5T7W7 516 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 PYROXD1Q8WU10 500 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 PEX13Q92968 403 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 EBNA1BP2Q99848 306 aaKnown RBP18.31■□□□□ 0.52
RFFL-211ENST00000584541 C19orf43Q9BQ61 176 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 KIFC1Q9BW19 673 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 C11orf16Q9NQ32 467 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 CHRAC1Q9NRG0 131 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 KCTD5Q9NXV2 234 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 RIMKLBQ9ULI2 386 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 CHMP2BQ9UQN3 213 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 TEX264Q9Y6I9 313 aa18.31■□□□□ 0.52
RFFL-211ENST00000584541 A0A0U1RQS6 177 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 FAM237BA0A1B0GVD1 139 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 A0A1W2PQU0 124 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 RGSL1A5PLK6 1076 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 MROH6A6NGR9 719 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 MAP3K13O43283 966 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 BANF1O75531 89 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 TTC4O95801 387 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 POLBP06746 335 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 C1SP09871 688 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 TDGF1P13385 188 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 C6P13671 934 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 PGAM1P18669 254 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 PAMP19021 973 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 DMWDQ09019 674 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 SGCGQ13326 291 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 NUMA1Q14980 2115 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 HP1BP3Q5SSJ5 553 aaPredicted RBP18.3■□□□□ 0.52
RFFL-211ENST00000584541 ZDHHC20Q5W0Z9 365 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 HORMAD1Q86X24 394 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 ANKMY2Q8IV38 441 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 GSPT2Q8IYD1 628 aaKnown RBP18.3■□□□□ 0.52
RFFL-211ENST00000584541 MAML2Q8IZL2 1156 aaPredicted RBP18.3■□□□□ 0.52
RFFL-211ENST00000584541 FBXO36Q8NEA4 188 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 OR4K2Q8NGD2 314 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 GPR174Q9BXC1 333 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 C1QTNF7Q9BXJ2 289 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 IL17CQ9P0M4 197 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 ZC3H7BQ9UGR2 993 aaKnown RBP18.3■□□□□ 0.52
RFFL-211ENST00000584541 RAB21Q9UL25 225 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 PLXNA2O75051 1894 aa18.3■□□□□ 0.52
RFFL-211ENST00000584541 CCDC78A2IDD5 438 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 IGLON5A6NGN9 336 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 WNT9AO14904 365 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms