RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	SESN2	P58004	480 aa	Predicted RBP	12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	MSLN	Q13421	630 aa	Predicted RBP	12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	POU6F1	Q14863	301 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	ELF2	Q15723	593 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	HIF1A	Q16665	826 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	CDKN3	Q16667	212 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	KCTD19	Q17RG1	926 aa	Predicted RBP	12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	ZNF765	Q7L2R6	523 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	LPCAT2	Q7L5N7	544 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	TMC3	Q7Z5M5	1100 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	TSPAN33	Q86UF1	283 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	CAND1	Q86VP6	1230 aa	Known RBP	12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	NRSN1	Q8IZ57	195 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	FAM160A2	Q8N612	972 aa	Predicted RBP	12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	LRRN4CL	Q8ND94	238 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	UBXN4	Q92575	508 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	ART4	Q93070	314 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	LRRC39	Q96DD0	335 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	NAT9	Q9BTE0	207 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	WRAP53	Q9BUR4	548 aa	Known RBP	12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	TSPYL1	Q9H0U9	437 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	DUSP15	Q9H1R2	295 aa	Predicted RBP	12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	MRM3	Q9HC36	420 aa	Known RBP	12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	EPB41L5	Q9HCM4	733 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	GDF3	Q9NR23	364 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	SAMD15	Q9P1V8	674 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	MTRF1L	Q9UGC7	380 aa	Known RBP	12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	MBD1	Q9UIS9	605 aa	Predicted RBP	12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	RIMKLB	Q9ULI2	386 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	DMTF1	Q9Y222	760 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	PKP3	Q9Y446	797 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	TCAF1	Q9Y4C2	921 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	SCN8A	Q9UQD0	1980 aa		12.01	□□□□□ -0.49
FANCA-231	ENST00000568626	ESYT3	A0FGR9	886 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	MAGEB16	A2A368	324 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	PRR23A	A6NEV1	266 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	SDR42E2	A6NKP2	422 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	WNT9A	O14904	365 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	TP73	O15350	636 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	EIF3H	O15372	352 aa	Known RBP eCLIP	12	□□□□□ -0.49
FANCA-231	ENST00000568626	STX7	O15400	261 aa	Known RBP	12	□□□□□ -0.49
FANCA-231	ENST00000568626	MMP20	O60882	483 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	LILRB5	O75023	590 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	CLDN7	O95471	211 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	PYGL	P06737	847 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	C1S	P09871	688 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	RHOXF2B	P0C7M4	288 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	PIRT	P0C851	137 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	BCKDHB	P21953	392 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	LPO	P22079	712 aa	Predicted RBP	12	□□□□□ -0.49
FANCA-231	ENST00000568626	HADHA	P40939	763 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	DPP6	P42658	865 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	PLTP	P55058	493 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	DCDC1	P59894	354 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	PPP2CB	P62714	309 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	PPP2CA	P67775	309 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	TCF15	Q12870	199 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	CBLB	Q13191	982 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	SGCG	Q13326	291 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	SEPT6	Q14141	434 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	ACOX1	Q15067	660 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	ZNF284	Q2VY69	593 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	PCID2	Q5JVF3	399 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	WDR45B	Q5MNZ6	344 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	SEL1L3	Q68CR1	1132 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	PMS2CL	Q68D20	193 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	CENPU	Q71F23	418 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	CEP68	Q76N32	757 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	CCNJL	Q8IV13	435 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	TTC30B	Q8N4P2	665 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	EIF1AD	Q8N9N8	165 aa	Known RBP	12	□□□□□ -0.49
FANCA-231	ENST00000568626	DTD2	Q96FN9	168 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	COQ10A	Q96MF6	247 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	PLEKHG4B	Q96PX9	1271 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	SMIM14	Q96QK8	99 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	RHOXF2	Q9BQY4	288 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	C1QTNF2	Q9BXJ5	285 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	SLC17A9	Q9BYT1	436 aa		12	□□□□□ -0.49
FANCA-231	ENST00000568626	C6orf106	Q9H6K1	298 aa	Predicted RBP	12	□□□□□ -0.49
FANCA-231	ENST00000568626	RRAGD	Q9NQL2	400 aa	Predicted RBP	12	□□□□□ -0.49
FANCA-231	ENST00000568626	ZNF106	Q9H2Y7	1883 aa	Known RBP	12	□□□□□ -0.49
FANCA-231	ENST00000568626	MYLK	Q15746	1914 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	FANCM	Q8IYD8	2048 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	USP34	Q70CQ2	3546 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	IGLON5	A6NGN9	336 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	METTL12	A8MUP2	240 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	MEI4	A8MW99	385 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626		A8MX80	341 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	LDB2	O43679	373 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	RECQL5	O94762	991 aa	Predicted RBP	11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	RHOBTB1	O94844	696 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	FSBP	O95073	299 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	SLC4A1	P02730	911 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	IGHV4-34	P06331	123 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	TPH1	P17752	444 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	HNRNPA2B1	P22626	353 aa	Known RBP	11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	MCM3	P25205	808 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	MGAT1	P26572	445 aa		11.99	□□□□□ -0.49
FANCA-231	ENST00000568626	CD27	P26842	260 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms