RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 ANXA7P20073 488 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 PON1P27169 355 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 AVPR1AP37288 418 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 GPR12P47775 334 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 GABRB2P47870 512 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 RFX5P48382 616 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 METAP2P50579 478 aaKnown RBP eCLIP1.68□□□□□ -2.14
USP3-209ENST00000558925 SUOXP51687 545 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 CDH12P55289 794 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 P2RX3P56373 397 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 PRAMEP78395 509 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 HSF1Q00613 529 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ECT2LQ008S8 904 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 POU5F1Q01860 360 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 FAM27E3Q08E93 113 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 CDC16Q13042 620 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 AIMP2Q13155 320 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 TNFAIP1Q13829 316 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 MYBPC2Q14324 1141 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 DAZAP2Q15038 168 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 INPP5JQ15735 1006 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 TCTN1Q2MV58 587 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ZNF284Q2VY69 593 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ZSCAN23Q3MJ62 389 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 PLEKHO1Q53GL0 409 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 ERMARDQ5T6L9 678 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 GARNL3Q5VVW2 1013 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 PMS2CLQ68D20 193 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ADALQ6DHV7 355 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 GPR139Q6DWJ6 353 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ISM2Q6H9L7 571 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 HEPHL1Q6MZM0 1159 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 NAA16Q6N069 864 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 CPLX2Q6PUV4 134 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 SARM1Q6SZW1 724 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 PQLC2Q6ZP29 291 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 MTSS1LQ765P7 747 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 TRILQ7L0X0 811 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 DPPA4Q7L190 304 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 GSTA5Q7RTV2 222 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 DNAJB7Q7Z6W7 309 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 YTHDF3Q7Z739 585 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 CTU1Q7Z7A3 348 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 PRPF39Q86UA1 669 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 DNAAF5Q86Y56 855 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 TICAM1Q8IUC6 712 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 DENND6AQ8IWF6 608 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 MB21D2Q8IYB1 491 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 TEX11Q8IYF3 940 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 CCDC105Q8IYK2 499 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 GALNT16Q8N428 558 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ENGASEQ8NFI3 743 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 OR6J1Q8NGC5 347 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 PRPF31Q8WWY3 499 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 POMGNT1Q8WZA1 660 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 INPP5DQ92835 1189 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 SNAPC3Q92966 411 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 FBXL8Q96CD0 374 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 RRNAD1Q96FB5 475 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 PGAM5Q96HS1 289 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 CLMNQ96JQ2 1002 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 SLC41A2Q96JW4 573 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 EGLN2Q96KS0 407 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 APOLD1Q96LR9 279 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ZNF48Q96MX3 618 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 BAG1Q99933 345 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 FAM118BQ9BPY3 351 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 WDR77Q9BQA1 342 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 TMEM47Q9BQJ4 181 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 MSTO1Q9BUK6 570 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 FAM129AQ9BZQ8 928 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 OR10A4Q9H209 315 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 CDT1Q9H211 546 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 KCNN2Q9H2S1 579 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 HRH4Q9H3N8 390 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 PIGMQ9H3S5 423 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 KLHL31Q9H511 634 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ESRP2Q9H6T0 727 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.68□□□□□ -2.14
USP3-209ENST00000558925 SH3GLB2Q9NR46 395 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 CYSLTR2Q9NS75 346 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 RNF146Q9NTX7 359 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 DECR2Q9NUI1 292 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ANKRD10Q9NXR5 420 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 CPSF2Q9P2I0 782 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 WDR35Q9P2L0 1181 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 SLC9A2Q9UBY0 812 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 SEC63Q9UGP8 760 aaKnown RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 MTMR6Q9Y217 621 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.68□□□□□ -2.14
USP3-209ENST00000558925 TRPV2Q9Y5S1 764 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 CLIC4Q9Y696 253 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 MAU2Q9Y6X3 613 aa1.68□□□□□ -2.14
USP3-209ENST00000558925 PASKQ96RG2 1323 aa1.67□□□□□ -2.14
USP3-209ENST00000558925 LOC102723996A0A087X1L8 192 aa1.67□□□□□ -2.14
USP3-209ENST00000558925 TMEM272A0A1B0GTI8 110 aa1.67□□□□□ -2.14
USP3-209ENST00000558925 hCG_1809904A0A1W2PP81 198 aa1.67□□□□□ -2.14
USP3-209ENST00000558925 A0A1W2PPE2 198 aa1.67□□□□□ -2.14
USP3-209ENST00000558925 A0A1W2PR64 198 aa1.67□□□□□ -2.14
USP3-209ENST00000558925 C17orf102A2RUQ5 167 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms