RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 DENND6AQ8IWF6 608 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 CMTM8Q8IZV2 173 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 FSTL5Q8N475 847 aaPredicted RBP12.3□□□□□ -0.44
CHD7-211ENST00000532149 PCDH20Q8N6Y1 951 aaKnown RBP12.3□□□□□ -0.44
CHD7-211ENST00000532149 MAB21L3Q8N8X9 362 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 GPATCH11Q8N954 259 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 DTX3LQ8TDB6 740 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 HCAR2Q8TDS4 363 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 ADAMTS19Q8TE59 1207 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 CMTM5Q96DZ9 223 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 ZNF641Q96N77 438 aaPredicted RBP12.3□□□□□ -0.44
CHD7-211ENST00000532149 RILPQ96NA2 401 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 CCDC28BQ9BUN5 200 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 HTATIP2Q9BUP3 242 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 LMAN2LQ9H0V9 348 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 TLE6Q9H808 572 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 ALG13Q9NP73 1137 aaKnown RBP12.3□□□□□ -0.44
CHD7-211ENST00000532149 RAD18Q9NS91 495 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 KLC4Q9NSK0 619 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHD7-211ENST00000532149 CFAP97Q9P2B7 532 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 SLC2A6Q9UGQ3 507 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 VPS51Q9UID3 782 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 SLC25A13Q9UJS0 675 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 HS3ST2Q9Y278 367 aa12.3□□□□□ -0.44
CHD7-211ENST00000532149 CEP350Q5VT06 3117 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 MUSKO15146 869 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 HDAC3O15379 428 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 HTRA2O43464 458 aaPredicted RBP12.29□□□□□ -0.44
CHD7-211ENST00000532149 TSPAN3O60637 253 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 SMIM24O75264 130 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 GOT2P00505 430 aaKnown RBP12.29□□□□□ -0.44
CHD7-211ENST00000532149 LMNAP02545 664 aaKnown RBP12.29□□□□□ -0.44
CHD7-211ENST00000532149 ESRRAP11474 423 aaPredicted RBP12.29□□□□□ -0.44
CHD7-211ENST00000532149 AOC1P19801 751 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 FDXRP22570 491 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 NNMTP40261 264 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 RPL14P50914 215 aaKnown RBP12.29□□□□□ -0.44
CHD7-211ENST00000532149 AQP5P55064 265 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 SATB1Q01826 763 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 CACNG1Q06432 222 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 ITGA9Q13797 1035 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 DNAL1Q4LDG9 190 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 C16orf46Q6P387 395 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 KDELC2Q7Z4H8 507 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 PTAR1Q7Z6K3 402 aaPredicted RBP12.29□□□□□ -0.44
CHD7-211ENST00000532149 TMPRSS6Q8IU80 811 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 SLC41A1Q8IVJ1 513 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 CENPLQ8N0S6 344 aaPredicted RBP12.29□□□□□ -0.44
CHD7-211ENST00000532149 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.29□□□□□ -0.44
CHD7-211ENST00000532149 DNAJC5GQ8N7S2 189 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 RFWD2Q8NHY2 731 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 SPPL3Q8TCT6 385 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 MYEOVQ96EZ4 313 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 LRIG1Q96JA1 1093 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 TBATAQ96M53 351 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 GPR78Q96P69 363 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 LYSMD1Q96S90 227 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 LBHD1Q9BQE6 289 aaPredicted RBP12.29□□□□□ -0.44
CHD7-211ENST00000532149 BTBD10Q9BSF8 475 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 MECRQ9BV79 373 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 CDH19Q9H159 772 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 TFB2MQ9H5Q4 396 aaKnown RBP12.29□□□□□ -0.44
CHD7-211ENST00000532149 SLC40A1Q9NP59 571 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 TDP1Q9NUW8 608 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 SMPD4Q9NXE4 827 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 MARK1Q9P0L2 795 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 KLHL42Q9P2K6 505 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 LHX3Q9UBR4 397 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 GGT7Q9UJ14 662 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 DNAJC16Q9Y2G8 782 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 PPIL1Q9Y3C6 166 aa12.29□□□□□ -0.44
CHD7-211ENST00000532149 CCDC162PA2VCL2 907 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 VPS26AO75436 327 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 IPO13O94829 963 aaKnown RBP12.28□□□□□ -0.44
CHD7-211ENST00000532149 PGLSO95336 258 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 POP4O95707 220 aaKnown RBP12.28□□□□□ -0.44
CHD7-211ENST00000532149 PRLP01236 227 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 PRKCGP05129 697 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 PCSK2P16519 638 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 CSKP41240 450 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 MPP1Q00013 466 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 PFKPQ01813 784 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 OVGP1Q12889 678 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 CDC16Q13042 620 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 PLEKHG6Q3KR16 790 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 SEL1L3Q68CR1 1132 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 METTL2BQ6P1Q9 378 aaKnown RBP12.28□□□□□ -0.44
CHD7-211ENST00000532149 CYB5D1Q6P9G0 228 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 ACAD11Q709F0 780 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 TMEM151AQ8N4L1 468 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 STAG3L4Q8TBR4 150 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 POF1BQ8WVV4 589 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 AUTS2Q8WXX7 1259 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 BADQ92934 168 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 ATXN7L3BQ96GX2 97 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 PDLIM5Q96HC4 596 aaKnown RBP12.28□□□□□ -0.44
CHD7-211ENST00000532149 DNAJC1Q96KC8 554 aaKnown RBP12.28□□□□□ -0.44
CHD7-211ENST00000532149 CYP2S1Q96SQ9 504 aa12.28□□□□□ -0.44
CHD7-211ENST00000532149 CCT7Q99832 543 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms