RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ZFR2Q9UPR6 939 aaKnown RBP21.77■■□□□ 1.08
C9orf3-222ENST00000496567 NUMA1Q14980 2115 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 IGLON5A6NGN9 336 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 LPOP22079 712 aaPredicted RBP21.76■■□□□ 1.07
C9orf3-222ENST00000496567 MGAT1P26572 445 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 STC1P52823 247 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 SGCGQ13326 291 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 SEPT6Q14141 434 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 ACOX1Q15067 660 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 TMEM259Q4ZIN3 620 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 PCID2Q5JVF3 399 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 DENND2CQ68D51 928 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 TTC30BQ8N4P2 665 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 PPHLN1Q8NEY8 458 aaKnown RBP21.76■■□□□ 1.07
C9orf3-222ENST00000496567 FOXJ1Q92949 421 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 FOXP3Q9BZS1 431 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 PKD2L2Q9NZM6 624 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 PKP3Q9Y446 797 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 ARL5AQ9Y689 179 aa21.76■■□□□ 1.07
C9orf3-222ENST00000496567 ZNF318Q5VUA4 2279 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 A0A0U1RQS6 177 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 AURKAO14965 403 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 SLC4A1P02730 911 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 BCKDHBP21953 392 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 NUDT1P36639 197 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 PPP2CBP62714 309 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 PPP2CAP67775 309 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 SPDYCQ5MJ68 293 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 SEL1L3Q68CR1 1132 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 ZDHHC24Q6UX98 284 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 LPCAT2Q7L5N7 544 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 NLRP9Q7RTR0 991 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 PTCD2Q8WV60 388 aaKnown RBP21.75■■□□□ 1.07
C9orf3-222ENST00000496567 ASB12Q8WXK4 309 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 RUBCNQ92622 972 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 C19orf43Q9BQ61 176 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 C1QTNF7Q9BXJ2 289 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 C1QTNF2Q9BXJ5 285 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 SLC17A9Q9BYT1 436 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 RAD18Q9NS91 495 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 SAMD15Q9P1V8 674 aa21.75■■□□□ 1.07
C9orf3-222ENST00000496567 MAGEB16A2A368 324 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 RGSL1A5PLK6 1076 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 METTL12A8MUP2 240 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 C10orf142B7Z368 130 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 WNT9AO14904 365 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 STX7O15400 261 aaKnown RBP21.74■■□□□ 1.07
C9orf3-222ENST00000496567 LATO43561 262 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 LDB2O43679 373 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 FSBPO95073 299 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 C1SP09871 688 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 CREB5Q02930 508 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 MTM1Q13496 603 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 HLTFQ14527 1009 aaKnown RBP eCLIP21.74■■□□□ 1.07
C9orf3-222ENST00000496567 ZNF284Q2VY69 593 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 FNBP1LQ5T0N5 605 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 HSD11B1LQ7Z5J1 315 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 LRRC39Q96DD0 335 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 COQ10AQ96MF6 247 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 DUSP15Q9H1R2 295 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-222ENST00000496567 ZDHHC18Q9NUE0 388 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 SYBUQ9NX95 663 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 IL17CQ9P0M4 197 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 MTRF1LQ9UGC7 380 aaKnown RBP21.74■■□□□ 1.07
C9orf3-222ENST00000496567 TCAF1Q9Y4C2 921 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 HRO43593 1189 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 RECQL5O94762 991 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-222ENST00000496567 MAT2AP31153 395 aaKnown RBP21.74■■□□□ 1.07
C9orf3-222ENST00000496567 SPINT3P49223 89 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 AGERQ15109 404 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 BBS9Q3SYG4 887 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 CCDC38Q502W7 563 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 SETMARQ53H47 684 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-222ENST00000496567 ZDHHC20Q5W0Z9 365 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 CASC4Q6P4E1 433 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 CENPUQ71F23 418 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 CEP68Q76N32 757 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 CYP2U1Q7Z449 544 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 NRSN1Q8IZ57 195 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 STYXQ8WUJ0 223 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 BIRC7Q96CA5 298 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 EID2BQ96D98 161 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 PHACTR1Q9C0D0 580 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 TSPYL1Q9H0U9 437 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 CDH19Q9H159 772 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 RIMKLBQ9ULI2 386 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.74■■□□□ 1.07
C9orf3-222ENST00000496567 COQ6Q9Y2Z9 468 aa21.74■■□□□ 1.07
C9orf3-222ENST00000496567 TRPM6Q9BX84 2022 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 MROH6A6NGR9 719 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 EIF3HO15372 352 aaKnown RBP eCLIP21.73■■□□□ 1.07
C9orf3-222ENST00000496567 LILRB5O75023 590 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 PAK4O96013 591 aaPredicted RBP21.73■■□□□ 1.07
C9orf3-222ENST00000496567 IGHV4-34P06331 123 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 ETV3P41162 512 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 CARSP49589 748 aaKnown RBP21.73■■□□□ 1.07
C9orf3-222ENST00000496567 CRADDP78560 199 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 DHX9Q08211 1270 aaKnown RBP21.73■■□□□ 1.07
C9orf3-222ENST00000496567 CBLBQ13191 982 aa21.73■■□□□ 1.07
C9orf3-222ENST00000496567 SRSF5Q13243 272 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms