RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 PDXPQ96GD0 296 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 SMIM14Q96QK8 99 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 BOCQ9BWV1 1114 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 GOLPH3Q9H4A6 298 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 CHKBQ9Y259 395 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 PPIL1Q9Y3C6 166 aa33.24■■■□□ 2.91
CBX4-203ENST00000494546 A0A0U1RQS6 177 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 TMEM202A6NGA9 273 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 TNFP01375 233 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 TRIM23P36406 574 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 AP1B1Q10567 949 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 C6orf132Q5T0Z8 1188 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 GUSBP11Q6P575 273 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 MFSD7Q6UXD7 560 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 GAS2L3Q86XJ1 694 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 OR56A4Q8NGH8 313 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 OR1E3Q8WZA6 343 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 LGR4Q9BXB1 951 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 TDRD1Q9BXT4 1180 aaKnown RBP33.23■■■□□ 2.91
CBX4-203ENST00000494546 LUC7LQ9NQ29 371 aaKnown RBP33.23■■■□□ 2.91
CBX4-203ENST00000494546 KCTD5Q9NXV2 234 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 ALG6Q9Y672 507 aa33.23■■■□□ 2.91
CBX4-203ENST00000494546 GOLGA6CA6NDK9 693 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 GOLGA6BA6NDN3 693 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 OPA1O60313 960 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 MT-CO3P00414 261 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 GP1BAP07359 652 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 GOLGA6DP0CG33 693 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 CA4P22748 312 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 KELP23276 732 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 HADHBP55084 474 aaKnown RBP33.22■■■□□ 2.91
CBX4-203ENST00000494546 PDK1Q15118 436 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 Q6ZVL8 140 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 EFL1Q7Z2Z2 1120 aaKnown RBP33.22■■■□□ 2.91
CBX4-203ENST00000494546 CBARPQ8N350 705 aaPredicted RBP33.22■■■□□ 2.91
CBX4-203ENST00000494546 GLMNQ92990 594 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 PANX2Q96RD6 677 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 ABCG4Q9H172 646 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 FGF22Q9HCT0 170 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 GOLGA6AQ9NYA3 693 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 MOSPD1Q9UJG1 213 aa33.22■■■□□ 2.91
CBX4-203ENST00000494546 A0A0J9YYE9 177 aa33.21■■■□□ 2.91
CBX4-203ENST00000494546 PSMD11O00231 422 aa33.21■■■□□ 2.91
CBX4-203ENST00000494546 TRBC1P01850 177 aa33.21■■■□□ 2.91
CBX4-203ENST00000494546 HOXC4P09017 264 aaPredicted RBP33.21■■■□□ 2.91
CBX4-203ENST00000494546 RPIAP49247 311 aa33.21■■■□□ 2.91
CBX4-203ENST00000494546 IFI35P80217 286 aaPredicted RBP33.21■■■□□ 2.91
CBX4-203ENST00000494546 ZBTB17Q13105 803 aa33.21■■■□□ 2.91
CBX4-203ENST00000494546 LRRC66Q68CR7 880 aa33.21■■■□□ 2.91
CBX4-203ENST00000494546 SLC35F3Q8IY50 421 aa33.21■■■□□ 2.91
CBX4-203ENST00000494546 SCG3Q8WXD2 468 aaKnown RBP33.21■■■□□ 2.91
CBX4-203ENST00000494546 MRPL40Q9NQ50 206 aaKnown RBP33.21■■■□□ 2.91
CBX4-203ENST00000494546 SEPT10Q9P0V9 454 aa33.21■■■□□ 2.91
CBX4-203ENST00000494546 DGKBQ9Y6T7 804 aa33.21■■■□□ 2.91
CBX4-203ENST00000494546 SOWAHDA6NJG2 315 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 PPP1R12AO14974 1030 aaPredicted RBP33.2■■■□□ 2.91
CBX4-203ENST00000494546 PSTPIP1O43586 416 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 CD86P42081 329 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 LLGL1Q15334 1064 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 FAM182AQ5T1J6 154 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 CRTC1Q6UUV9 634 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 GKN2Q86XP6 184 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 LPCAT1Q8NF37 534 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 MAPK15Q8TD08 544 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 OLFM3Q96PB7 478 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 CEP41Q9BYV8 373 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 PCDH9Q9HC56 1237 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 SIRPGQ9P1W8 387 aa33.2■■■□□ 2.91
CBX4-203ENST00000494546 CDKN2BP42772 138 aa33.19■■■□□ 2.9
CBX4-203ENST00000494546 B4GALNT4Q76KP1 1039 aa33.19■■■□□ 2.9
CBX4-203ENST00000494546 HEATR4Q86WZ0 1026 aa33.19■■■□□ 2.9
CBX4-203ENST00000494546 CACTIN-AS1Q8N1I8 211 aa33.19■■■□□ 2.9
CBX4-203ENST00000494546 CNTD1Q8N815 330 aa33.19■■■□□ 2.9
CBX4-203ENST00000494546 DCBLD1Q8N8Z6 715 aa33.19■■■□□ 2.9
CBX4-203ENST00000494546 NXPE2Q96DL1 559 aa33.19■■■□□ 2.9
CBX4-203ENST00000494546 PHPT1Q9NRX4 125 aaPredicted RBP33.19■■■□□ 2.9
CBX4-203ENST00000494546 GULP1Q9UBP9 304 aa33.19■■■□□ 2.9
CBX4-203ENST00000494546 CD84Q9UIB8 345 aa33.19■■■□□ 2.9
CBX4-203ENST00000494546 EPN1Q9Y6I3 576 aaPredicted RBP33.19■■■□□ 2.9
CBX4-203ENST00000494546 EME2A4GXA9 379 aaPredicted RBP33.18■■■□□ 2.9
CBX4-203ENST00000494546 PDE2AO00408 941 aaPredicted RBP33.18■■■□□ 2.9
CBX4-203ENST00000494546 PRLP01236 227 aa33.18■■■□□ 2.9
CBX4-203ENST00000494546 MYCLP1P12525 358 aaPredicted RBP33.18■■■□□ 2.9
CBX4-203ENST00000494546 KAZNQ674X7 775 aa33.18■■■□□ 2.9
CBX4-203ENST00000494546 RAET1GQ6H3X3 334 aa33.18■■■□□ 2.9
CBX4-203ENST00000494546 LVRNQ6Q4G3 990 aa33.18■■■□□ 2.9
CBX4-203ENST00000494546 RFLNAQ6ZTI6 216 aa33.18■■■□□ 2.9
CBX4-203ENST00000494546 TMTC1Q8IUR5 882 aa33.18■■■□□ 2.9
CBX4-203ENST00000494546 RBM15Q96T37 977 aaKnown RBP eCLIP33.18■■■□□ 2.9
CBX4-203ENST00000494546 CYP4F12Q9HCS2 524 aa33.18■■■□□ 2.9
CBX4-203ENST00000494546 DKK4Q9UBT3 224 aa33.18■■■□□ 2.9
CBX4-203ENST00000494546 WDFY3Q8IZQ1 3526 aa33.18■■■□□ 2.9
CBX4-203ENST00000494546 A0A0A6YYK5 440 aaPredicted RBP33.17■■■□□ 2.9
CBX4-203ENST00000494546 TNFRSF10CO14798 259 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 NDUFA10O95299 355 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 MMP2P08253 660 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 TFDP2Q14188 446 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 SPOCD1Q6ZMY3 1216 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 TECPR1Q7Z6L1 1165 aa33.17■■■□□ 2.9
CBX4-203ENST00000494546 SDR16C5Q8N3Y7 309 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms