RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SLC4A1P02730 911 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 HLA-DQB2P05538 268 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 MYCLP1P12525 358 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 ZNF30P17039 623 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 CR2P20023 1033 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 RPL26P61254 145 aaKnown RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 DSC2Q02487 901 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 CYP4F3Q08477 520 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 PPIDQ08752 370 aaKnown RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 RALGDSQ12967 914 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 AGERQ15109 404 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 ALG11Q2TAA5 492 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 TPRG1LQ5T0D9 272 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 C6orf132Q5T0Z8 1188 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 LRRC66Q68CR7 880 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 PNCKQ6P2M8 343 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 DOK6Q6PKX4 331 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 LVRNQ6Q4G3 990 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 LRRC69Q6ZNQ3 347 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 KANSL1Q7Z3B3 1105 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 HEATR4Q86WZ0 1026 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 MARCH9Q86YJ5 346 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 RCOR2Q8IZ40 523 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 TEX26Q8N6G2 289 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 PQLC3Q8N755 202 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 ARL10Q8N8L6 244 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 TC2NQ8N9U0 490 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 PLA2G15Q8NCC3 412 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 FAM46DQ8NEK8 389 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 OR6C4Q8NGE1 309 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 WDR48Q8TAF3 677 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 MDM1Q8TC05 714 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 KIAA1524Q8TCG1 905 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 TFB1MQ8WVM0 346 aaKnown RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 SPOCK2Q92563 424 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 MAML1Q92585 1016 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 P3H4Q92791 437 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 FUBP1Q96AE4 644 aaKnown RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 AP2M1Q96CW1 435 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 DTD2Q96FN9 168 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 SCRN2Q96FV2 425 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 AGAP3Q96P47 875 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 LGMNQ99538 433 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 TDRD1Q9BXT4 1180 aaKnown RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 TCEAL2Q9H3H9 227 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 CARS2Q9HA77 564 aaKnown RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 CYP4F12Q9HCS2 524 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 PKD2L2Q9NZM6 624 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 PADI4Q9UM07 663 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 RPL26L1Q9UNX3 145 aaKnown RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 CHKBQ9Y259 395 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 HYOU1Q9Y4L1 999 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 TRPM6Q9BX84 2022 aa9.13□□□□□ -0.95
HDAC6-232ENST00000489053 KMT2BQ9UMN6 2715 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-232ENST00000489053 ITPR1Q14643 2758 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 A0A0A6YYK5 440 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-232ENST00000489053 A0A0J9YYE9 177 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 C1orf232A0A0U1RR37 186 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 B4DGG1 531 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 TNFRSF10CO14798 259 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 YY2O15391 372 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 RRP8O43159 456 aaKnown RBP9.12□□□□□ -0.95
HDAC6-232ENST00000489053 CST8O60676 142 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 GCATO75600 419 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 NDUFA10O95299 355 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 ASMTLO95671 621 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 TRBC1P01850 177 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 HOXC4P09017 264 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-232ENST00000489053 MYF5P13349 255 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 TGM2P21980 687 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 GNPDA1P46926 289 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 CLDN6P56747 220 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 IFI35P80217 286 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-232ENST00000489053 SPIDRQ14159 915 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 TCEAL1Q15170 157 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 PCSK7Q16549 785 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 TFDP3Q5H9I0 405 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 SLC9A4Q6AI14 798 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 C11orf63Q6NUN7 778 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 GUSBP11Q6P575 273 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 RBM44Q6ZP01 1051 aaKnown RBP9.12□□□□□ -0.95
HDAC6-232ENST00000489053 Q6ZVL8 140 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 HSD11B1LQ7Z5J1 315 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 NT5DC3Q86UY8 548 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 PLD5Q8N7P1 536 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 LRRN4Q8WUT4 740 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 OR1E3Q8WZA6 343 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 LRRC45Q96CN5 670 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 PDXPQ96GD0 296 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 COQ10AQ96MF6 247 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 DCBLD2Q96PD2 775 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 MCCC1Q96RQ3 725 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-232ENST00000489053 BAG1Q99933 345 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-232ENST00000489053 MLPHQ9BV36 600 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-232ENST00000489053 GSDMCQ9BYG8 508 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 CEP41Q9BYV8 373 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 RBSNQ9H1K0 784 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 DPEP2Q9H4A9 486 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 RAD18Q9NS91 495 aa9.12□□□□□ -0.95
HDAC6-232ENST00000489053 WDR70Q9NW82 654 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms